Germanium (Ge) is often found as trace element in undeformed sphalerite (ZnS). However, the presence of Ge-minerals (oxides, chloritoids and/or sulphides with up to 70 wt% Ge) is remarkable in Pb-Zn deposits from the Variscan Pyrenean Axial Zone. Their abundance is controlled by the chemical and/or the mechanical processes that affect rare element concentration from sulphides which have undergone deformation and metamorphism. In this study, we document the microstructures and chemical heterogeneities in sphalerite, based on EBSD (electron backscatter diffraction) coupled to LA-ICPMS in situ analyses. Deformation induces the dynamic recrystallization of sphalerite. Recrystallized domains have low Ge contents (1-50 ppm Ge) whereas porphyroclastic sphalerite grains commonly show higher Ge concentrations (up to 650 ppm Ge). Ge-minerals (up to 70 wt% Ge) are exclusively hosted by the Ge-poor recrystallized domains. We propose that Ge was removed from the sphalerite crystal lattice during sulphide recrystallization, and was subsequently concentrated in Ge-minerals, leaving behind a Gedepleted fine-grained recrystallized sphalerite matrix. Numerous sulphide ore types enriched in rare elements like Pyrenean deposits may present recrystallization features and we suggest evaluating the potential of such deposits by integrating chemical and structural informations at the micrometer scale using state-of-theart analytical techniques in exploration methods.