A community perspective on the concept of marine holobionts: state-of-the-art, challenges, and future directions - Archive ouverte HAL
Article Dans Une Revue PeerJ Preprints Année : 2019

A community perspective on the concept of marine holobionts: state-of-the-art, challenges, and future directions

1 LBI2M - Laboratoire de Biologie Intégrative des Modèles Marins
2 SBR - Station biologique de Roscoff = Roscoff Marine Station
3 UMR MARBEC - MARine Biodiversity Exploitation and Conservation
4 Institute for Inorganic and Analytical Chemistry
5 IFREMER - Institut Français de Recherche pour l'Exploitation de la Mer
6 Uppsala University
7 SZN - Stazione Zoologica Anton Dohrn
8 LPCV - Laboratoire de physiologie cellulaire végétale
9 CCMAR - Centre of Marine Sciences [Faro]
10 LS2N - Laboratoire des Sciences du Numérique de Nantes
11 LS2N - équipe COMBI - Combinatoire et Bioinformatique
12 SAMS - Scottish Association for Marine Science
13 School of Science and the Environment
14 Universität Bremen [Deutschland] = University of Bremen [Germany] = Université de Brême [Allemagne]
15 ABIMS - ABiMS - Informatique et bioinformatique = Analysis and Bioinformatics for Marine Science
16 FR2424 - Fédération de recherche de Roscoff
17 IBENS - Institut de biologie de l'ENS Paris
18 ABICE - Adaptation et Biologie des Invertébrés en Conditions Extrêmes
19 Penn State - Pennsylvania State University
20 Faculty of Science, School of Life and Environmental Sciences
21 SCELSE - Singapore Centre for Environmental Life Sciences Engineering [Singapore]
22 USIMS - University of Sydney Institute of Marine Science
23 Max Planck Institute for Marine Microbiology
24 MCAM - Molécules de Communication et Adaptation des Micro-organismes
25 IIM CSIC
26 GEOMAR - Helmholtz Centre for Ocean Research [Kiel]
27 Department of Biological Sciences, University of Essex
28 OSEB - Origine, structure et évolution de la biodiversité
29 University of Gdansk
30 University of Pennsylvania
31 Laboratory of Protistology & Aquatic Ecology
32 Institute of Microbiology and Swiss Institute of Bioinformatics
33 IHPE - Interactions Hôtes-Pathogènes-Environnements
34 CEA - Commissariat à l'énergie atomique et aux énergies alternatives
35 ADMM - Adaptation et diversité en milieu marin
Ulisse Cardini
  • Fonction : Auteur
  • PersonId : 1049906
Claire M M Gachon
José Pintado Valverde
  • Fonction : Auteur
Derek Skillings
  • Fonction : Auteur
  • PersonId : 1009796
Eve Toulza
Fabrice Not

Résumé

Host-microbe interactions play crucial roles in marine ecosystems, but we still have very little understanding of the mechanisms that govern these relationships, the evolutionary processes that shape them, and their ecological consequences. The holobiont concept is a renewed paradigm in biology that can help describe and understand these complex systems. It posits that a host and its associated microbiota, living together in a long-lasting relationship, form the holobiont, and have to be studied together, as a coherent biological and functional unit, in order to understand the biology, ecology and evolution of the organisms. Here we discuss critical concepts and opportunities in marine holobiont research and identify key challenges in the field. We highlight the potential economic, sociological, and environmental impacts of the holobiont concept in marine biological, evolutionary, and environmental sciences with comparisons to terrestrial science whenever appropriate. A deeper understanding of such complex systems, however, will require further technological and conceptual advances. The most significant challenge will be to bridge functional research on simple and tractable model systems and global approaches. This will require scientists to work together as an (inter)active community in order to address, for instance, ecological and evolutionary questions and the roles of holobionts in biogeochemical cycles.
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Dates et versions

hal-03166872 , version 1 (09-07-2019)
hal-03166872 , version 2 (25-03-2021)

Identifiants

Citer

Simon Dittami, Enrique Arboleda, J.-C. Auguet, Arite Bigalke, Enora Briand, et al.. A community perspective on the concept of marine holobionts: state-of-the-art, challenges, and future directions. PeerJ Preprints, 2019, 7, pp.e27519v1. ⟨10.7287/peerj.preprints.27519v1⟩. ⟨hal-03166872v1⟩
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