Metagenomic exploration of antibiotic resistance in soil - Archive ouverte HAL
Article Dans Une Revue Current Opinion in Microbiology Année : 2011

Metagenomic exploration of antibiotic resistance in soil

Jean-Michel Monier
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Sandrine Demanèche
  • Fonction : Auteur
Tom Delmont
Alban Mathieu
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Timothy M Vogel
Pascal Simonet

Résumé

The ongoing development of nnetagenomic approaches is providing the means to explore antibiotic resistance in nature and address questions that could not be answered previously with conventional culture-based strategies. The number of available environmental metagenomic sequence datasets is rapidly expanding and henceforth offer the ability to gain a more comprehensive understanding of antibiotic resistance at the global scale. Although there is now evidence that the environment constitutes a vast reservoir of antibiotic resistance gene determinants (ARGDs) and that the majority of ARGDs acquired by human pathogens may have an environmental origin, a better understanding of their diversity, prevalence and ecological significance may help predict the emergence and spreading of newly acquired resistances. Recent applications of metagenomic approaches to the study of ARGDs in natural environments such as soil should help overcome challenges concerning expanding antibiotic resistances.

Dates et versions

hal-00629407 , version 1 (05-10-2011)

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Citer

Jean-Michel Monier, Sandrine Demanèche, Tom Delmont, Alban Mathieu, Timothy M Vogel, et al.. Metagenomic exploration of antibiotic resistance in soil. Current Opinion in Microbiology, 2011, 14 (3), pp.229-235. ⟨10.1016/j.mib.2011.04.010⟩. ⟨hal-00629407⟩
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