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High-throughput identification of viral termini and packaging mechanisms in virome datasets using PhageTermVirome
Julian R. Garneau
,
Véronique Legrand
,
Martial Marbouty
,
Maximilian O. Press
,
Dean R. Vik
,
et al.
Article dans une revue
pasteur-03369740v1
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Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins
Virginia S. Lioy
,
Axel Cournac
,
Martial Marbouty
,
Stéphane Duigou
,
Julien Mozziconacci
,
et al.
Article dans une revue
hal-02180787v1
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Genome-wide chromatin and expression datasets of various pathogenic ascomycetes
Sébastien Bloyer
,
Romain Koszul
Autre publication scientifique
hal-03722802v1
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Generating High-Resolution Hi-C Contact Maps of Bacteria
Agnès Thierry
,
Charlotte Cockram
Chapitre d'ouvrage
pasteur-03686079v1
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Scaffolding bacterial genomes and probing host-virus interactions in gut microbiome by proximity ligation (chromosome capture) assay
Martial Marbouty
,
Lyam Baudry
,
Axel Cournac
,
Romain Koszul
Article dans une revue
pasteur-02866658v1
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3D genome reconstruction from chromosomal contacts
Annick Lesne
,
Julien Riposo
,
Paul Roger
,
Axel Cournac
,
Julien Mozziconacci
Article dans une revue
hal-02324120v1
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Smc3 acetylation, Pds5 and Scc2 control the translocase activity that establishes cohesin-dependent chromatin loops
Nathalie Bastié
,
Christophe Chapard
,
Lise Dauban
,
Olivier Gadal
,
Frederic Beckouet
,
et al.
Article dans une revue
hal-03697578v1
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Filling the gap: Micro-C accesses the nucleosomal fiber at 100-1000 bp resolution.
Julien Mozziconacci
,
Romain Koszul
Article dans une revue
pasteur-01420328v1
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Effect of nuclear architecture on the efficiency of double-strand break repair
Neta Agmon
,
Batia Liefshitz
,
Christophe Zimmer
,
Emmanuelle Fabre
,
Martin Kupiec
Article dans une revue
pasteur-02446715v1
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Gateway to genetic exchange? DNA double-strand breaks in the bdelloid rotifer Adineta vaga submitted to desiccation.
B Hespeels
,
K Knapen
,
D Hanot-Mambres
,
A-C Heuskin
,
F Pineux
,
et al.
Article dans une revue
pasteur-01420001v1
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Chromosome folding and prophage activation reveal specific genomic architecture for intestinal bacteria
Quentin Lamy-Besnier
,
Amaury Bignaud
,
Julian R Garneau
,
Marie Titecat
,
Devon E Conti
,
et al.
Article dans une revue
pasteur-04158849v1
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The silencing factor Sir3 is a molecular bridge that sticks together distant loci
Myriam Ruault
,
Vittore F Scolari
,
Luciana Lazar-Stefanita
,
Antoine Hocher
,
Isabelle Loïodice
,
et al.
2020
Pré-publication, Document de travail
hal-03013702v1
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Metagenomes Binning Using Proximity-Ligation Data
Martial Marbouty
,
Romain Koszul
Chapitre d'ouvrage
pasteur-03369745v1
|
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Generation of gene-level resolution chromosome contact maps in bacteria and archaea
Charlotte Cockram
,
Agnès Thierry
,
Romain Koszul
Article dans une revue
pasteur-03376845v1
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Generation of a Metagenomics Proximity Ligation 3C Library of a Mammalian Gut Microbiota
Théo Foutel-Rodier
,
Agnès Thierry
,
Romain Koszul
,
Martial Marbouty
High-Density Sequencing Applications in Microbial Molecular Genetics, 612, pp.183-195, 2018, Methods in Enzymology, 978-0-12-815993-4. ⟨10.1016/bs.mie.2018.08.001⟩
Chapitre d'ouvrage
pasteur-02866616v1
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Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging.
Martial Marbouty
,
Antoine Le gall
,
Diego I Cattoni
,
Axel Cournac
,
Alan Koh
,
et al.
Article dans une revue
pasteur-01419993v1
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Kinetic Signature of Cooperativity in the Irreversible Collapse of a Polymer
Vittore F Scolari
,
Guillaume Mercy
,
Romain Koszul
,
Annick Lesne
,
Julien Mozziconacci
Article dans une revue
hal-01992814v1
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L'organisation 3D des chromosomes synthétiques de levure
Guillaume Mercy
Génomique, Transcriptomique et Protéomique [q-bio.GN]. Sorbonne Université, 2018. Français. ⟨NNT : 2018SORUS034⟩
Thèse
tel-02111002v1
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Transcription-induced domains form the elementary constraining building blocks of bacterial chromosomes
Amaury Bignaud
,
Charlotte Cockram
,
Céline Borde
,
Justine Groseille
,
Eric Allemand
,
et al.
Article dans une revue
hal-04468362v1
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Gene level resolution of bacteria and archaea genome folding
Charlotte Cockram
,
Agnès Thierry
,
Roxane Lestini
,
Romain Koszul
2021
Pré-publication, Document de travail
hal-03106900v1
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Absence of chromosome axis protein recruitment prevents meiotic recombination chromosome-wide in the budding yeast Lachancea kluyveri
Sylvain Legrand
,
Asma Saifudeen
,
Hélène Bordelet
,
Julien Vernerey
,
Arnaud Guille
,
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (12), pp.e2312820121. ⟨10.1073/pnas.2312820121⟩
Article dans une revue
pasteur-04603593v1
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Sister chromatid cohesion halts DNA loop expansion
Nathalie Bastié
,
Christophe Chapard
,
Axel Cournac
,
Sanae Nejmi
,
Henri Mboumba
,
et al.
Article dans une revue
pasteur-04603601v1
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Sir3 mediates long-range chromosome interactions in budding yeast
Myriam Ruault
,
Vittore F Scolari
,
Luciana Lazar-Stefanita
,
Antoine Hocher
,
Isabelle Loïodice
,
et al.
Article dans une revue
hal-03169421v1
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MetaHiC phage-bacteria infection network reveals active cycling phages of the healthy human gut
Martial Marbouty
,
Agnès Thierry
,
Gael A. Millot
,
Romain Koszul
Article dans une revue
pasteur-03369735v1
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Purification of G1 daughter cells from different Saccharomycetes species through an optimized centrifugal elutriation procedure.
Martial Marbouty
,
Caroline Ermont
,
Bernard Dujon
,
Guy-Franck Richard
,
Romain Koszul
Article dans une revue
pasteur-01420008v1
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A predictive computational model of the dynamic 3D interphase yeast nucleus.
Hua Wong
,
Hervé Marie-Nelly
,
Sébastien Herbert
,
Pascal Carrivain
,
Hervé Blanc
,
et al.
Article dans une revue
pasteur-01420017v1
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Tridimensional infiltration of DNA viruses into the host genome shows preferential contact with active chromatin
Pierrick Moreau
,
Axel Cournac
,
Gianna Aurora Palumbo
,
Martial Marbouty
,
Shogofa Mortaza
,
et al.
Article dans une revue
pasteur-02866759v1
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Crosstalk between Hepatitis B Virus and the 3D Genome Structure
João Diogo Dias
,
Nazim Sarica
,
Axel Cournac
,
Romain Koszul
,
Christine Neuveut
Article dans une revue
pasteur-03689314v1
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Investigating chromosome dynamics through Hi-C assembly
Lyam Baudry
Thèse
tel-02935877v1
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Tethering of molecular parasites on inactive chromatin in eukaryote nucleus
Fabien Girard
Thèse
tel-04524712v1
|
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