Unveiling the dynamics of enzymatic activity in crowded environments: insights from hyaluronidase kinetics and interactions in extracellular matrix mimics
Résumé
The extracellular matrix (ECM) is dominated in-vivo by macromolecular crowding and resultant
excluded volume effects [1]. It is composed of a large quantity of various macromolecules which fill
the interstitial space within cells forming a hydrated gel [2]. ECM is a highly dynamic structure. It is
constantly regenerated, remodeled and degraded to maintain tissue homeostasis, through the action
of metalloenzymes such as collagenase, hyaluronidase (Hyal) and elastase [3]. The present
investigation is part of a large multidisciplinary project, X-Crowd, aiming to scrutinize the kinetics of
these enzymes in a realistic picture. For this purpose, crowded environments mimicking the ECM invitro
are used. The crowding environment was simulated using dextran at two different molecular
weights (40 and 476 kDa), respecting so the ratio between enzyme and crowder size.
We have first studied the activity of Hyal, a glycosidase responsible for the degradation of hyaluronic
acid (HA), a large polysaccharide responsible for skin hydration and cartilage lubrication. Capillary
electrophoresis (CE), thanks to its miniaturized dimensions, was advantageously used to monitor the
enzymatic reaction, after optimizing the injection step, taking into account the media viscosity and
complexity. To better understand the effect of dextran on the catalytic activity of Hyal, a small
substrate, decasaccharide (10-mers), was firstly used. Results were compared to those obtained with
the high molecular weight natural substrate, HA. Moreover, the interaction between Hyal and the
Dextran was characterized using microscale thermophoresis (MST), a biophysical miniaturized
technique based on fluorescence detection. Hyal was thus labeled with ATTO-647 and studied in the
presence of dextran with different buffer compositions and pH conditions. The inhibition study of this
enzyme by a referenced inhibitor firstly, and a home-made inhibitor secondly, was also carried out in
dilute and crowded media. Finally, ionic mobility spectrometry (IMS) was used to evaluate the effect
of crowding on the folding state and conformational dynamics of Hyal. CE combined to IMS and MST
allowed to disentangle the impact of crowding on Hyal kinetics, folding state and interactions.
Therefore, this reaffirms the significance of conducting biological assays under conditions that closely
mimic in vivo environments. The approach we propose ensures the development of efficient and more
reliable bioactive compounds during the development process.
Acknowledgement
The authors acknowledge the Agence Nationale de la Recherche (ANR) for financial support of the XCrowd
project (ANR-21-CE44-0020) and QUALICHIM (APR-IA-PF 2021-00149467) for financial support
of ICOA.
References
[1] A.S. Zeiger, F.C. Loe, R. Li, M. Raghunath, K.J. Van Vliet, PLoS ONE. 2012, 7 e37904.
[2] A.D. Theocharis, S.S. Skandalis, C. Gialeli, N.K. Karamanos, Adv. Drug Deliv. Rev. 2016, 97 4–27.
[3] C. Chantrain, Y.A. DeClerck, Med. Sci. 2002, 18, 565–575.