Phytoplankton automated in vivo/in situ observations: towards a new approach of Essential Ocean Variables of marine coastal ecosystems.
Luis Felipe Artigas
(1, 2)
,
Patricia Cabrera
(3)
,
Pascal Claquin
(4, 5)
,
Véronique Créach
(6)
,
Clémentine Gallot
(2, 1, 7, 8)
,
Fernando Gómez
(2)
,
Reinhoud de Blok
(3)
,
Elisabeth Debusschere
(3)
,
Klaas Deneudt
(3)
,
Gérald Grégori
(7, 8)
,
Weinke Eikrem
(9)
,
Alexandre Epinoux
(2, 1, 8, 10)
,
Pierre-Alexandre Hébert
(11, 1)
,
Lumi Haraguchi
(12)
,
Zéline Hubert
(1, 2)
,
Emilie Houliez
(2, 1)
,
Jean-Olivier Irisson
(13, 14)
,
Bengt Karlson
(15)
,
Kaisa Kraft
(12)
,
Jacco Kromkamp
(16, 17)
,
Michael Lindh
(13, 14)
,
Alain Lefebvre
(18, 10)
,
Fabien Lombard
(13, 14)
,
Fabrice Lizon
(2, 19)
,
Arnaud Louchart
(20, 2)
,
Klas Ove Möller
(21)
,
Jonas Mortelmans
(3)
,
Emilie Poisson-Caillault
(11)
,
Machteld Rijkeboer
(22)
,
Thomas Rutten
,
Timo Tamminen
(12)
,
Lennert Tyberghein
(3)
,
Melilotus Thyssen
(7, 8)
,
Saskia Ruhel
(21)
,
Jukka Seppälä
(12)
,
Lars Stemmann
(13, 14)
,
Arnold Veen
(22)
,
Guillaume Wacquet
(2, 11, 23, 18)
,
Jorg Wollschläger
(21)
,
Patsy Ylöstalo
(12)
1
ULCO -
Université du Littoral Côte d'Opale
2 LOG - Laboratoire d’Océanologie et de Géosciences (LOG) - UMR 8187
3 VLIZ - Flanders Marine Institute
4 BOREA - Biologie des Organismes et Ecosystèmes Aquatiques
5 UNICAEN - Université de Caen Normandie
6 CEFAS - Centre for Environment, Fisheries and Aquaculture Science [Lowestoft]
7 MIO - Institut méditerranéen d'océanologie
8 CNRS - Centre National de la Recherche Scientifique
9 NIVA - Norwegian Institute for Water Research
10 IFREMER - Institut Français de Recherche pour l'Exploitation de la Mer
11 LISIC - Laboratoire d'Informatique Signal et Image de la Côte d'Opale
12 SYKE - Finnish Environment Institute
13 LOV - Laboratoire d'océanographie de Villefranche
14 SU - Sorbonne Université
15 SMHI - Swedish Meteorological and Hydrological Institute
16 NIOZ - Royal Netherlands Institute for Sea Research
17 Nederlands Instituut Voor Ecologie - NIOO (NETHERLANDS)
18 LERBL - Laboratoire Environnement Ressources de Boulogne-sur-Mer
19 Université de Lille
20 NIOO-KNAW - Netherlands Institute of Ecology
21 GKSS - Helmholtz-Zentrum Geesthacht
22 RWS RIJKSWATERSTAAT CENTRE FOR WATER MANAGEMENT LELYSTAD NLD
23 UMONS - Université de Mons / University of Mons
2 LOG - Laboratoire d’Océanologie et de Géosciences (LOG) - UMR 8187
3 VLIZ - Flanders Marine Institute
4 BOREA - Biologie des Organismes et Ecosystèmes Aquatiques
5 UNICAEN - Université de Caen Normandie
6 CEFAS - Centre for Environment, Fisheries and Aquaculture Science [Lowestoft]
7 MIO - Institut méditerranéen d'océanologie
8 CNRS - Centre National de la Recherche Scientifique
9 NIVA - Norwegian Institute for Water Research
10 IFREMER - Institut Français de Recherche pour l'Exploitation de la Mer
11 LISIC - Laboratoire d'Informatique Signal et Image de la Côte d'Opale
12 SYKE - Finnish Environment Institute
13 LOV - Laboratoire d'océanographie de Villefranche
14 SU - Sorbonne Université
15 SMHI - Swedish Meteorological and Hydrological Institute
16 NIOZ - Royal Netherlands Institute for Sea Research
17 Nederlands Instituut Voor Ecologie - NIOO (NETHERLANDS)
18 LERBL - Laboratoire Environnement Ressources de Boulogne-sur-Mer
19 Université de Lille
20 NIOO-KNAW - Netherlands Institute of Ecology
21 GKSS - Helmholtz-Zentrum Geesthacht
22 RWS RIJKSWATERSTAAT CENTRE FOR WATER MANAGEMENT LELYSTAD NLD
23 UMONS - Université de Mons / University of Mons
Luis Felipe Artigas
- Fonction : Auteur
- PersonId : 1234611
- ORCID : 0000-0003-0512-5315
- IdRef : 077468201
Pascal Claquin
- Fonction : Auteur
- PersonId : 181237
- IdHAL : pascal-claquin
- ORCID : 0000-0002-5183-203X
- IdRef : 080269907
Thomas Rutten
- Fonction : Auteur
Résumé
As phytoplankton is essential in supporting food webs and mediating biogeochemical cycles, it became crucial to complement discrete sampling and laboratory methods to address this compartment at its finest temporal and spatial scale. Within the “Joint European Research Infrastructure for Coastal Observatories – Novel EXperTise” (JERICO-NEXT), scientists proceeded to the exploration of novel phytoplankton automated in vivo/in situ techniques, based on single cell/particle or bulk optical characteristics. These techniques were implemented in a variety of monitoring platforms (fixed stations, moorings, research vessels, ships of opportunity), from oligotrophic (West Mediterranean) to mesotrophic and eutrophic marine coastal waters (English Channel, North Sea and Baltic Sea). These approaches could represent warning systems in water quality through phytoplankton total abundance and biomass, composition changes and the occurrence of blooms, including harmful algal blooms HAB, of special interest in areas of fishing, aquaculture and tourism. At the dawn of the UN Decade of the Ocean, the JERICO-S3 (Science, Services, Sustainability) project tends to generalise these approaches and seeks to standardise as much as possible their operability and capacity in addressing phytoplankton diversity and productivity, moving towards a new approach of Essential Ocean Variables (EOVs). Moreover, the development of automated tools for data analysis, using machine-learning and deep learning and will allow integrating these data into European marine data infrastructures available for research and marine management.