Investigating the effect of the spatial topology of multimodular GHs on an insoluble substrate
Résumé
The wide diversity of carbohydrate-active enzymes (CAZymes) reflects the equally wide diversity in the
composition and chemical bonds of the plant cell wall polysaccharides. This diversity is also reflected in the
different strategies developed by microorganisms to circumvent the recalcitrance of these substrates to
biological degradation. These aspects have been studied extensively for decades. CAZymes are also very
diverse in terms of architecture, from the simplest to the most complex, such as the cellulosome. Such
organisations have been shown to be important for catalytic function. However, the role of spatial topology
and distances between the different domains of individual enzymes acting on a complex and insoluble
substrate is underestimated. We propose a systematic approach to investigate this question, focusing on
glycoside hydrolases (GHs). Our approach is based on two small proteins, Jo and In, which spontaneously form
an intramolecular isopeptide bond and, incidentally, provide an original means of orienting GHs [1]. Chimeric
multimodular GHs were produced and purified, and their structure in solution was solved by Small Angle X-
rays Scattering (Fig.1A) [2]. In addition to their activity towards soluble and insoluble substrates, differences
in the targeting of multimodular GHs in wheat straw were assessed in situ, monitored by immunological
labelling (Fig.1B). We also demonstrated that X-ray microtomography is particularly well-suited to reveal the
modification of the plant cell walls within the sample, at different stages of the enzymatic deconstruction