Detecting MicroRNAs in Plant Genomes with miRkwood - Archive ouverte HAL
Chapitre D'ouvrage Année : 2022

Detecting MicroRNAs in Plant Genomes with miRkwood

Résumé

We present miRkwood, a comprehensive software tool developed to identify microRNAs and their precursor in plant genomes, with or without small-RNA-seq sequencing data. We describe how to install the software, how to set up and run it, and how to explore and analyse the results: genomic annotations, secondary structure of the precursor, alignments, reads distribution.
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Sylvain Legrand, Isabelle Guigon, Hélène Touzet. Detecting MicroRNAs in Plant Genomes with miRkwood. Alejandro Pereira-Santana; Samuel David Gamboa-Tuz; Luis Carlos Rodríguez-Zapata. Plant Comparative Genomics, 2512, Springer; Humana, pp.103-120, 2022, Methods in Molecular Biology, 978-1-0716-2428-9. ⟨10.1007/978-1-0716-2429-6_8⟩. ⟨hal-03952910⟩
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