Conformational H-bonding Modulations of the Iron Active Site Cysteine Ligand of Superoxide Reductase: Absorption and Resonance Raman Studies
Résumé
Superoxide reductases (SORs) are mononuclear nonheme iron enzymes involved in superoxide radical detoxification in some
microorganisms. Their atypical active site is made of an iron atom pentacoordinated by four equatorial nitrogen atoms from
histidine residues and one axial sulfur atom from a cysteinate residue, which plays a central role in catalysis. In most SORs,
the residue immediately following the cysteinate ligand is an asparagine, which belongs to the second coordination sphere
and is expected to have a critical influence on the properties of the active site. In this work, in order to investigate the role
of this asparagine residue in the Desulfoarculus baarsii enzyme (Asn117), we carried out, in comparison with the wild-type
enzyme, absorption and resonance Raman (RR) studies on a SOR mutant in which Asn117 was changed into an alanine. A
RR analysis was developed in order to assign the different bands using an excitation in the (Cys116)-S- Fe3+ charge transfer
band. By investigating the correlation between the (Cys116)-S- Fe3+ charge transfer band maximum with the frequency of
each RR band in different SOR forms, we assessed the contribution of the ν(Fe-S) vibration among the different RR bands.
The data showed that Asn117, by making hydrogen bond interactions with Lys74 and Tyr76, allows a rigidification of the
backbone of the Cys116 ligand, as well as that of the neighboring residues Ile118 and His119. Such a structural role of Asn117
has a deep impact on the S-Fe bond. It results in a tight control of the H-bond distance between the Ile118 and His119 NH
peptidic moiety with the cysteine sulfur ligand, which in turn enables a fine tuning of the S-Fe bond strength, an essentiel
property for the SOR active site. This study illustrates the intricate roles of second coordination sphere residues to adjust
the ligand to metal bond properties in the active site of metalloenzymes.
Domaines
Chimie-Physique [physics.chem-ph]
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Desbois et al. Manuscript pour HAL.pdf (1.54 Mo)
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Desbois et al. Suppl Info.pdf (1.31 Mo)
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