Plasmids shape the diverse accessory resistomes of Escherichia coli ST131
Mots clés
- urinary tract infection
- Sequence Identity and Similarity
- SNP
- single nucleotide polymorphism
- ST
- sequence type
- TDA
- topological data analysis
- UTI
- SIAS
- plasmid
- infection
- Genome
- fimbrial
- evolution
- Escherichia coli
- ST131. Abbreviations: AMR
- mobile genetic element
- MGE
- incompatibility
- Inc
- Human Microbiome Project
- HMP
- horizontal gene transfer
- HGT
- extra-intestinal pathogenic E. coli
- ExPEC
- extended-spectrum beta-lactamase
- ESBL
- cefotaximase
- CTX-M
- antimicrobial resistance
Domaines
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