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Communication Dans Un Congrès Année : 2019

Immersive Analysis of 3D Multi-Cellular In-Vitro and In-Silico Cell Cultures

Résumé

Immersive visualization has become affordable for many laboratories and researchers with the advent of consumer virtual reality devices. This paper introduces two according scenarios, (1) modeling biological simulations of multi-cellular tumor spheroids, and (2) analysing spatial features in fluorescence microscopy data of organoids. Based on these, we derive a list of functional requirements for an immersive workbench that integrates both image data analysis and modeling perspectives. Three existing, exploratory prototypes are presented and discussed. Finally, we propose two specific applications of immersive technology for the support of the targeted user groups' research, one for the collaborative definition of segmentation "ground truth", and one for the analysis of spatial features in organoids.
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Dates et versions

hal-02879722 , version 1 (24-06-2020)

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Andreas Knote, Sabine Fischer, Sylvain Cussat-Blanc, Florian Niebling, David Bernard, et al.. Immersive Analysis of 3D Multi-Cellular In-Vitro and In-Silico Cell Cultures. IEEE International Conference on Artificial Intelligence and Virtual Reality (AIVR 2019), Dec 2019, San Diego, CA, United States. pp.82-89, ⟨10.1109/AIVR46125.2019.00021⟩. ⟨hal-02879722⟩
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