A sustainable and simple synthesis procedure involving the co-assembly of green phenolic resin and amphiphilic polymer template in water/ethanol mixture at room temperature to synthesize nitrogen doped mesoporous carbon is reported herein. Guanine is proposed as a novel nitrogen-based precursor which is able to create H-bondings both with the phenolic resin and the template allowing the formation of mesoporous carbons with nitrogen atoms uniformly distributed in their framework. The influence of the synthesis procedure, template amount and annealing temperature on the carbon textural properties, structure and surface chemistry were investigated. For several conditions, carbon materials with ordered pore size and high nitrogen content (up to 10.6 at %) could be achieved. The phase separation procedure combined with optimal amount of template favor the formation of ordered mesoporous carbons with higher specific surface area while the increase in the temperature induces a decrease in the surface area and amount of heteroatoms (N and O). The electrochemical performances as electrode in supercapacitors were evaluated in acidic medium and the capacitance was closely related to the material conductivity and surface chemistry.