Article Dans Une Revue Bioinformatics Année : 2010

pegas: an R package for population genetics with an integrated-modular approach

Résumé

pegas is a new package for the analysis of population genetic data. It is written in R and is integrated with two other existing R packages (ape and adegenet). pegas provides functions for standard population genetic methods, as well as low-level functions for developing new methods. The flexible and efficient graphical capabilities of R are used for plotting haplotype networks as well as for other functionalities. pegas emphasises the need to further develop an integrated–modular approach for software dedicated to the analysis of population genetic data. Availability: pegas is distributed through the Comprehensive R Archive Network (CRAN): http://cran.r-project.org/web/packages/pegas/index.html Further information may be found at: http://ape.mpl.ird.fr/pegas/ Contact: Emmanuel.Paradis@ird.fr

Fichier principal
Vignette du fichier
Paradis_pegas.pdf (134.35 Ko) Télécharger le fichier
Origine Fichiers produits par l'(les) auteur(s)
Licence
Loading...

Dates et versions

hal-01822130 , version 1 (23-06-2018)

Licence

Identifiants

Citer

E. Paradis. pegas: an R package for population genetics with an integrated-modular approach. Bioinformatics, 2010, 26 (3), pp.419 - 420. ⟨10.1093/bioinformatics/btp696⟩. ⟨hal-01822130⟩
511 Consultations
1828 Téléchargements

Altmetric

Partager

  • More