COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access - Archive ouverte HAL Accéder directement au contenu
Article Dans Une Revue Metabolomics Année : 2015

COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access

Antonio Rosato
Catherine Deborde
Daniel Jacob
Philippe Rocca-Serra
Marko Sysi-Aho
  • Fonction : Auteur
Christian Ludwig
  • Fonction : Auteur
  • PersonId : 923742
Annick Moing
Matej Oresic
Royston Goodacre

Résumé

Metabolomics has become a crucial phenotyping technique in a range of research fields including medicine, the life sciences, biotechnology and the environmental sciences. This necessitates the transfer of experimental information between research groups, as well as potentially to publishers and funders. After the initial efforts of the metabolomics standards initiative, minimum reporting standards were proposed which included the concepts for metabolomics databases. Built by the community, standards and infrastructure for metabolomics are still needed to allow storage, exchange, comparison and re-utilization of metabolomics data. The Framework Programme 7 EU Initiative ‘coordination of standards in metabolomics’ (COSMOS) is developing a robust data infrastructure and exchange standards for metabolomics data and metadata. This is to support workflows for a broad range of metabolomics applications within the European metabolomics community and the wider metabolomics and biomedical communities’ participation. Here we announce our concepts and efforts asking for re-engagement of the metabolomics community, academics and industry, journal publishers, software and hardware vendors, as well as those interested in standardisation worldwide (addressing missing metabolomics ontologies, complex-metadata capturing and XML based open source data exchange format), to join and work towards updating and implementing metabolomics standards.
Fichier principal
Vignette du fichier
2015_Salek_Metabolomics_1.pdf (814.62 Ko) Télécharger le fichier
Origine : Fichiers éditeurs autorisés sur une archive ouverte
Loading...

Dates et versions

hal-01165673 , version 1 (27-05-2020)

Identifiants

Citer

Reza M. Salek, Steffen Neumann, Daniel Schober, Jan Hummel, Kenny Billiau, et al.. COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access. Metabolomics, 2015, 11 (6), pp.Journal no. 11306. ⟨10.1007/s11306-015-0810-y⟩. ⟨hal-01165673⟩
214 Consultations
64 Téléchargements

Altmetric

Partager

Gmail Facebook X LinkedIn More