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Conference Papers Year : 2014

Quality metrics for benchmarking sequences comparison tools

Abstract

Comparing sequences is a daily task in bioinformatics and many software try to fulfill this need by proposing fast execution times and accurate results. Introducing a new software in this field requires to compare it to recognized tools with the help of well defined metrics. A set of quality metrics is proposed that enables a systematic approach for comparing alignment tools. These metrics have been implemented in a dedicated software, allowing to produce textual and graphical benchmark artifacts.
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Dates and versions

hal-01088595 , version 1 (28-11-2014)

Identifiers

  • HAL Id : hal-01088595 , version 1

Cite

Erwan Drezen, Dominique Lavenier. Quality metrics for benchmarking sequences comparison tools. 9th Brazilian Symposium on Bioinformatics, BSB 2014, Oct 2014, Belo Honrizonte, Brazil. pp.144-153. ⟨hal-01088595⟩
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