A UIMA Wrapper for the NCBO Annotator - Archive ouverte HAL Accéder directement au contenu
Article Dans Une Revue Bioinformatics Année : 2010

A UIMA Wrapper for the NCBO Annotator

Résumé

Summary: The Unstructured Information Management Architecture (UIMA) framework and Web Services are emerging as useful tools for integrating biomedical text mining tools. This note describes our work, which wraps the National Center for Biomedical Ontology (NCBO) Annotator – an ontology-based annotation service – to make it available as a component in UIMA workflows. Availability: This wrapper is freely available on the web at http://bionlp-uima.sourceforge.net/ as part of the UIMA tools distribution from the Center for Computational Pharmacology (CCP) at the University of Colorado School of Medicine. It has been implemented in Java for support on Mac OS X, Linux and MS Windows.
Fichier principal
Vignette du fichier
Article_UIMA_Wrapper_BioInformatics10.pdf (81.68 Ko) Télécharger le fichier
Origine : Fichiers produits par l'(les) auteur(s)
Loading...

Dates et versions

hal-00504107 , version 1 (20-07-2010)
hal-00504107 , version 2 (29-11-2019)

Identifiants

Citer

Christophe Roeder, Clement Jonquet, Nigam H. Shah, William A. Baumgartner Jr, Lawrence Hunter. A UIMA Wrapper for the NCBO Annotator. Bioinformatics, 2010, 26 (14), pp.1800-1801. ⟨10.1093/bioinformatics/btq250⟩. ⟨hal-00504107v1⟩
53 Consultations
140 Téléchargements

Altmetric

Partager

Gmail Facebook X LinkedIn More