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A specialised SKI complex assists the cytoplasmic RNA exosome in the absence of direct association with ribosomes

Elodie Zhang , Varun Khanna , Estelle Dacheux , Abdelkader Namane , Antonia Doyen , et al.
EMBO Journal, 2019, 38 (14), pp.e100640. ⟨10.15252/embj.2018100640⟩
Article dans une revue hal-02175007v1
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Homologous Recombination and the Formation of Complex Genomic Rearrangements

Aurèle Piazza , Wolf-Dietrich Heyer
Trends in Cell Biology, 2019, 29 (2), pp.135-149. ⟨10.1016/j.tcb.2018.10.006⟩
Article dans une revue hal-02999807v1
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Interaction entre protéines et acides nucléiques et régulation de l’expression des gènes

Gwenaël Badis
Génomique, Transcriptomique et Protéomique [q-bio.GN]. Sorbonne Université, 2019
HDR tel-04048246v1

The puzzling construction of the conidial outer layer of Aspergillus fumigatus

Isabel Valsecchi , Vincent Dupres , Jean-Philippe Michel , Magalie I Duchateau , Mariette Matondo , et al.
Cellular Microbiology, 2019, 21 (5), pp.e12994. ⟨10.1111/cmi.12994⟩
Article dans une revue pasteur-02306662v1
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Cdc48-associated complex bound to 60S particles is required for the clearance of aberrant translation products

Quentin Defenouillere , Yanhua Yao , John Mouaikel , Abdelkader Namane , Aurélie Galopier , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (13), pp.5046--5051. ⟨10.1073/pnas.1221724110⟩
Article dans une revue pasteur-01404018v1
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How cells kill a "killer" messenger

Cosmin Saveanu , Alain Jacquier
eLife, 2016, 5, pp.e16076. ⟨10.7554/eLife.16076⟩
Article dans une revue pasteur-01404013v1
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Impact of protein-protein interactions and phosphorylation on RNA decapping for nonsense mediated mRNA decay (NMD)

Agathe Gilbert
Biochemistry [q-bio.BM]. Sorbonne Université, 2022. English. ⟨NNT : 2022SORUS386⟩
Thèse tel-04265647v1
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Quantitative global studies reveal differential translational control by start codon context across the fungal kingdom

Edward W J Wallace , Corinne Maufrais , Jade Sales-Lee , Laura R Tuck , Luciana de Oliveira , et al.
Nucleic Acids Research, 2020, 48 (5), pp.2312-2331. ⟨10.1093/nar/gkaa060⟩
Article dans une revue pasteur-02651962v1
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The Toxicity of a Novel Antifungal Compound Is Modulated by Endoplasmic Reticulum-Associated Protein Degradation (ERAD) Components

Shriya S Raj , Karthik Krishnan , David S Askew , Olivier S Helynck , Peggy Suzanne , et al.
Antimicrobial Agents and Chemotherapy, 2016, 60 (3), pp.1438-1449. ⟨10.1128/AAC.02239-15⟩
Article dans une revue pasteur-01427574v1
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The ribosome-bound quality control complex remains associated to aberrant peptides during their proteasomal targeting and interacts with Tom1 to limit protein aggregation

Quentin Defenouillère , Abdelkader Namane , John Mouaikel , Alain Jacquier , Micheline Fromont-Racine
Molecular Biology of the Cell, 2017, 28 (9), pp.1165-1176. ⟨10.1091/mbc.E16-10-0746⟩
Article dans une revue pasteur-02861913v1
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Composition and Dynamics of Protein Complexes Measured by Quantitative Mass Spectrometry of Affinity-Purified Samples

Abdelkader Namane , Cosmin Saveanu
Frédéric Devaux. Yeast Functional Genomics, 2477, Springer US, pp.225-236, 2022, Methods in Molecular Biology, 978-1-0716-2257-5 (ebook). ⟨10.1007/978-1-0716-2257-5_13⟩
Chapitre d'ouvrage pasteur-04042946v1
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Synergy of the antibiotic colistin with echinocandin antifungals in Candida species.

Ute Zeidler , Marie-Elisabeth Bougnoux , Alexandru Lupan , Olivier Helynck , Antonia Doyen , et al.
Journal of Antimicrobial Chemotherapy, 2013, 68 (6), pp.1285-96. ⟨10.1093/jac/dks538⟩
Article dans une revue pasteur-00849830v1
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Systematic determination of transcription factor DNA-binding specificities in yeast

Lourdes Peña-Castillo , Gwenaël Badis
Frédéric Devaux. Yeast Functional Genomics, 1361, Humana Press, pp.203-225, 2016, Methods in Molecular Biology, 978-1-4939-3079-1. ⟨10.1007/978-1-4939-3079-1_12⟩
Chapitre d'ouvrage hal-02356251v1
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Investigation of RNA metabolism through large-scale genetic interaction profiling in yeast

Laurence Decourty , Christophe Malabat , Emmanuel Frachon , Alain Jacquier , Cosmin Saveanu
Nucleic Acids Research, 2021, pp.8535-8555. ⟨10.1093/nar/gkab680⟩
Article dans une revue hal-03320796v1
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Mécanismes de la dégradation des ARN dépendants ou indépendants de la déadénylation

Léna Audebert
Biochimie, Biologie Moléculaire. Sorbonne Université, 2022. Français. ⟨NNT : 2022SORUS374⟩
Thèse tel-03943917v1
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The p21-activated protein kinase inhibitor Skb15 and its budding yeast homologue are 60S ribosome assembly factors.

Cosmin Saveanu , Jean-Claude Rousselle , Pascal Lenormand , Abdelkader Namane , Alain Jacquier , et al.
Molecular and Cellular Biology, 2007, 27 (8), pp.2897-909. ⟨10.1128/MCB.00064-07⟩
Article dans une revue pasteur-01404696v1
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Composition et dynamique des complexes protéiques impliqués dans le "nonsense-mediated mRNA decay" chez la levure Saccharomyces cerevisiae

Marine Dehecq
Biochimie, Biologie Moléculaire. Sorbonne Université, 2018. Français. ⟨NNT : 2018SORUS538⟩
Thèse tel-02489767v1

Deadenylation speed and mRNA stability : revisiting an old dogma

Gwenaël Badis
XIX TERM meeting Seville, Odile Porrua; Edouard Bertrand; Domenico Libri, Dec 2022, Seville (Spain), Spain
Communication dans un congrès hal-04048223v1
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Multiple roles of RNAs

Gwenaël Badis , Cosmin Saveanu , Claire Torchet
Master. Multiples roles of RNAs, https://research.pasteur.fr/fr/course/multiple-roles-of-rnas-2/, France. 2023
Cours hal-04048211v2

MybA, a transcription factor involved in conidiation and conidial viability of the human pathogen Aspergillus fumigatus

Isabel Valsecchi , Özlem Sarikaya-Bayram , Joanne Wong Sak Hoi , Laetitia Muszkieta , John Gibbons , et al.
Molecular Microbiology, 2017, 105 (6), pp.880-900. ⟨10.1111/mmi.13744⟩
Article dans une revue pasteur-02515185v1

The cryo-EM structure of a ribosome–Ski2-Ski3-Ski8 helicase complex

Christian Schmidt , Eva Kowalinski , Vivekanandan Shanmuganathan , Quentin Defenouillère , Katharina Braunger , et al.
Science, 2016, 354 (6318), pp.1431-1433. ⟨10.1126/science.aaf7520⟩
Article dans une revue pasteur-03431216v1

The Colibactin-Producing Escherichia coli alters the tumor microenvironment to immunosuppressive lipid overload facilitating colorectal cancer progression and chemoresistance.

Nilmara de Oliveira Alves , Guillaume Dalmasso , Darja Nikitina , Amaury Vaysse , Richard Ruez , et al.
41 ème CECED, Mar 2024, Monptellier, France
Communication dans un congrès hal-04543437v1
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Caractérisation fonctionnelle du complexe RQC dans le contrôle qualité de la traduction et le maintien de l'homéostasie des protéines

Quentin Defenouillere
Biologie cellulaire. Université Pierre et Marie Curie - Paris VI, 2015. Français. ⟨NNT : 2015PA066086⟩
Thèse tel-01296487v1

Structure of the 80S ribosome–Xrn1 nuclease complex

Petr Tesina , Elisabeth Heckel , Jingdong Cheng , Micheline Fromont-Racine , Robert Buschauer , et al.
Nature Structural and Molecular Biology, 2019, 26 (4), pp.275-280. ⟨10.1038/s41594-019-0202-5⟩
Article dans une revue hal-02174970v1
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Yeast ribosomal protein L7 and its homologue Rlp7 are simultaneously present at distinct sites on pre-60S ribosomal particles

Reyes Babiano , Gwenaël Badis , Cosmin Saveanu , Abdelkader Namane , Antonia Doyen , et al.
Nucleic Acids Research, 2013, 41 (20), pp.9461--9470. ⟨10.1093/nar/gkt726⟩
Article dans une revue pasteur-01404017v1
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eIF2A represses cell wall biogenesis gene expression in Saccharomyces cerevisiae

Laura Meyer , Baptiste Courtin , Maïté Gomard , Abdelkader Namane , Emmanuelle Permal , et al.
PLoS ONE, 2023, 18 (11), pp.e0293228. ⟨10.1371/journal.pone.0293228⟩
Article dans une revue pasteur-04338108v1
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Ethylzingerone, a Novel Compound with Antifungal Activity

Tristan Rossignol , Sadri Znaidi , Murielle Chauvel , Rebecca Wesgate , Laurence Decourty , et al.
Antimicrobial Agents and Chemotherapy, 2021, 65 (4), pp.e02711-20. ⟨10.1128/AAC.02711-20⟩
Article dans une revue hal-03294712v1
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Exposure to selenomethionine causes selenocysteine misincorporation and protein aggregation in Saccharomyces cerevisiae.

Pierre Plateau , Cosmin Saveanu , Roxane Lestini , Marc Dauplais , Laurence Decourty , et al.
Scientific Reports, 2017, 7, pp.44761. ⟨10.1038/srep44761⟩
Article dans une revue pasteur-01496769v1
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Rqc1 and Ltn1 Prevent C-terminal Alanine-Threonine Tail (CAT-tail)-induced Protein Aggregation by Efficient Recruitment of Cdc48 on Stalled 60S Subunits

Quentin Defenouillère , Elodie Zhang , Abdelkader Namane , John Mouaikel , Alain Jacquier , et al.
Journal of Biological Chemistry, 2016, 291 (23), pp.12245-12253. ⟨10.1074/jbc.m116.722264⟩
Article dans une revue pasteur-03431234v1
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Unusual SMG suspects recruit degradation enzymes in nonsense‐mediated mRNA decay

Agathe Gilbert , Cosmin Saveanu
BioEssays, 2022, pp.2100296. ⟨10.1002/bies.202100296⟩
Article dans une revue pasteur-03606359v1