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Listeria monocytogenes sequence type 1 is predominant in ruminant rhombencephalitis

Margaux Dreyer , Lisandra Aguilar-Bultet , Sebastian Rupp , Claudia Guldimann , Roger Stephan , et al.
Scientific Reports, 2016, 6 (1), pp.36419. ⟨10.1038/srep36419⟩
Journal articles pasteur-02185472v1
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The ZKIR assay, a novel real-time PCR method for the detection of Klebsiella pneumoniae and closely related species in environmental Samples

Elodie Barbier , Carla Rodrigues , Géraldine G. Depret , Virginie Passet , Laurent Gal , et al.
Applied and Environmental Microbiology, 2020, 86 (7), pp.1-39. ⟨10.1128/AEM.02711-19⟩
Journal articles hal-02464159v1
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Genetic structure and evolution of the Leishmania genus in Africa and Eurasia: what does MLSA tell us

Fouad El Baidouri , Sylvain Brisse , Vincent Berry , François Chevenet , Laure Diancourt , et al.
PLoS Neglected Tropical Diseases, 2013, 7 (6), pp.e2255. ⟨10.1371/journal.pntd.0002255⟩
Journal articles lirmm-00818822v1
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Molecular and epidemiological characterization of carbapenemase-producing Enterobacteriaceae in Norway, 2007 to 2014

Ørjan Samuelsen , Søren Overballe-Petersen , Jørgen Vildershøj Bjørnholt , Sylvain Brisse , Michel Doumith , et al.
PLoS ONE, 2017, 12 (11), pp.e0187832. ⟨10.1371/journal.pone.0187832⟩
Journal articles pasteur-01649193v1

Global spatial dynamics and vaccine-induced fitness changes of Bordetella pertussis

Noémie Lefrancq , Valérie Bouchez , Nadia Fernandes , Alex-Mikael Barkoff , Thijs Bosch , et al.
Science Translational Medicine, 2022, 14 (642), pp.eabn3253. ⟨10.1126/scitranslmed.abn3253⟩
Journal articles pasteur-03821663v1

Epidemiology of methicillin-susceptible Staphylococcus aureus lineages in five major African towns: high prevalence of Panton-Valentine leukocidin genes.

S. Breurec , C. Fall , R. Pouillot , P. Boisier , S. Brisse , et al.
Clinical Microbiology and Infection, 2011, 17 (4), pp.633-639. ⟨10.1111/j.1469-0691.2010.03320.x⟩
Journal articles pasteur-00583687v1
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Hospital effluent: A reservoir for carbapenemase-producing Enterobacterales?

Niamh Cahill , Louise O'Connor , Bláthnaid Mahon , Áine Varley , Elaine Mcgrath , et al.
Science of the Total Environment, 2019, 672, pp.618-624. ⟨10.1016/j.scitotenv.2019.03.428⟩
Journal articles pasteur-03329713v1

Corynebacterium ulcerans as filamentous branching rods

Claudie Lamoureux , Schéhérazade Rézig , Hervé Le Bars , Felipe Le Divenah , Didier Tandé , et al.
Clinical Microbiology and Infection, 2022, ⟨10.1016/j.cmi.2022.11.016⟩
Journal articles pasteur-03930509v1
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Genome Microevolution of Chikungunya Viruses Causing the Indian Ocean Outbreak

Isabelle Schuffenecker , Isabelle Iteman , Alain Michault , Severine Murri , Lionel Frangeul , et al.
PLoS Medicine, 2006, 3 (7), pp.e263. ⟨10.1371/journal.pmed.0030263⟩
Journal articles pasteur-01659363v1

Human Leptospira Isolates Circulating in Mayotte (Indian Ocean) Have Unique Serological and Molecular Features

Pascale Bourhy , Louis Collet , Tinne Lernout , Farida Zinini , R. A. Hartskeerl , et al.
Journal of Clinical Microbiology, 2012, 50 (2), pp.307--311. ⟨10.1128/JCM.05931-11⟩
Journal articles hal-01274597v1
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Draft Genome Sequence of Campylobacter coli Strain IPSID-1 Isolated from a Patient with Immunoproliferative Small Intestinal Disease

Alexis Criscuolo , Arnaud de La Blanchardière , Solène Coeuret , Virginie Passet , Virginie Saguet-Rysanek , et al.
Genome Announcements, 2014, 2 (2), pp.e00079-14. ⟨10.1128/genomeA.00079-14⟩
Journal articles pasteur-02869569v1

Psychrobacter Pasteurii and Psychrobacter Piechaudii Sp. Nov., Two Novel Species Within the Genus Psychrobacter

Raquel Hurtado-Ortiz , Anissa Nazimoudine , Alexis Criscuolo , Perrine Hugon , Damien Mornico , et al.
International Journal of Systematic and Evolutionary Microbiology, 2017, 67 (9), pp.3192-3197. ⟨10.1099/ijsem.0.002065⟩
Journal articles pasteur-02612610v1
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Genome characteristics of Bordetella pertussis isolates from Tunisia

Ikram Ben Fraj , Valérie Bouchez , Hanen Smaoui , Amel Kechrid , Sylvain Brisse
Journal of Medical Microbiology, 2019, 68 (9), pp.1320-1323. ⟨10.1099/jmm.0.001042⟩
Journal articles pasteur-03221002v1
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High-Resolution Typing of Staphylococcus epidermidis Based on Core Genome Multilocus Sequence Typing To Investigate the Hospital Spread of Multidrug-Resistant Clones

Anne Jamet , Julien Guglielmini , Bryan Brancotte , Mathieu Coureuil , Daniel Euphrasie , et al.
Journal of Clinical Microbiology, 2021, 59 (3), ⟨10.1128/JCM.02454-20⟩
Journal articles hal-03218144v1
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Characterization of Klebsiella pneumoniae isolates from a mother-child cohort in Madagascar

Andriniaina Rakotondrasoa , Virginie Passet , Perlinot Herindrainy , Benoît Garin , Elsa Kermorvant-Duchemin , et al.
Journal of Antimicrobial Chemotherapy, 2020, 75 (7), pp.736-1746. ⟨10.1093/jac/dkaa107⟩
Journal articles pasteur-02862906v1

Cutaneous ulcers revealing diphtheria: A re-emerging disease imported from Indian Ocean countries?

C. Alberto , S. Osdoit , A.-P. Villani , L. Bellec , O. Belmonte , et al.
Annales de Dermatologie et de Vénéréologie, 2021, 148 (1), pp.34-39. ⟨10.1016/j.annder.2020.04.024⟩
Journal articles hal-03273914v1
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Klebsiella MALDI TypeR: a web-based tool for Klebsiella identification based on MALDI-TOF mass spectrometry

Sébastien Bridel , Stephen C Watts , Louise M Judd , Taylor Harshegyi , Virginie Passet , et al.
Research in Microbiology, 2021, 172 (4-5), pp.103835. ⟨10.1016/j.resmic.2021.103835⟩
Journal articles pasteur-03230671v1

Patterns of selection on Plasmodium falciparum erythrocyte-binding antigens after the colonization of the New World.

Erhan Yalcindag , Virginie Rougeron , Eric Elguero , Céline Arnathau , Durand Patrick , et al.
Molecular Ecology Notes, 2014, 23 (8), pp.1979-93. ⟨10.1111/mec.12696⟩
Journal articles istex pasteur-01109668v1
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Comparaison des séquences génomiques pour la surveillance épidémiologique et l’investigation d’épidémies : 3 approches complémentaires

François Gravey , Sylvain Brisse
2023
Scientific blog post hal-04034603v1
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Gestion du risque nosocomial autour de cinq cas de diphtérie diagnostiqués au sein d'un CHU

R Cruchet , J Brousse , Marie-Agnès Denis , S Poutrel , L Hees , et al.
XXVIIIème Congrès de la Société Française d'Hygiène Hospitalière (SF2H), Jun 2017, NICE, France
Conference papers hal-01777440v1
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Spontaneous and post-surgical/traumatic Klebsiella pneumoniae meningitis: two distinct clinic-microbiological entities

Guillaume Rollin , Benjamin Rossi , Sylvain Brisse , Dominique Decré , Véronique Leflon-Guibout , et al.
International Journal of Infectious Diseases, 2021, ⟨10.1016/j.ijid.2021.11.013⟩
Journal articles hal-03428997v1
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Evolutionary History of Helicobacter pylori Sequences Reflect Past Human Migrations in Southeast Asia.

Sebastien Breurec , Bertrand Guillard , Sopheak Hem , Sylvain Brisse , Fatou Bintou Dieye , et al.
PLoS ONE, 2011, 6 (7), pp.e22058. ⟨10.1371/journal.pone.0022058⟩
Journal articles pasteur-00622842v1

Clonogrouping, a Rapid Multiplex PCR Method for Identification of Major Clones of Listeria monocytogenes

Viviane Chenal-Francisque , Mylène M Maury , Morgane Lavina , Marie Touchon , Alexandre Leclercq , et al.
Journal of Clinical Microbiology, 2015, 53 (10), pp.3355-3358. ⟨10.1128/JCM.00738-15⟩
Journal articles pasteur-02390981v1
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LiSEQ – whole-genome sequencing of a cross-sectional survey of Listeria monocytogenes in ready-to-eat foods and human clinical cases in Europe

Anaïs Painset , Jonas T Björkman , Kristoffer Kiil , Laurent Guillier , Jean-François Mariet , et al.
Microbial Genomics, 2019, 5 (2), ⟨10.1099/mgen.0.000257⟩
Journal articles pasteur-02139091v1
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Design, development and validation of a real-time PCR assay for detection of Klebsiella pneumoniae complex in environmental matrixes

Elodie Barbier , C. Rodrigues , Géraldine Depret , V. Passet , Laurent Gal , et al.
1. One Health European Joint Programme Annual Scientific Meeting, May 2019, Dublin, Ireland. , 2019
Poster communications hal-02787597v1

Taxonomic status of Corynebacterium diphtheriae biovar Belfanti and proposal of Corynebacterium belfantii sp. nov

Melody Dazas , Edgar Badell , Annick Carmi-Leroy , Alexis Criscuolo , Sylvain Brisse
International Journal of Systematic and Evolutionary Microbiology, 2018, 68 (12), pp.3826-3831. ⟨10.1099/ijsem.0.003069⟩
Journal articles hal-03273925v1
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Correction: Genus-wide Leptospira core genome multilocus sequence typing for strain taxonomy and global surveillance

Julien Guglielmini , Pascale Bourhy , Olivier Schiettekatte , Farida Zinini , Sylvain Brisse , et al.
PLoS Neglected Tropical Diseases, 2020, 14 (8), pp.e0008673. ⟨10.1371/journal.pntd.0008673⟩
Journal articles pasteur-02938924v1
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Deciphering bartonella diversity, recombination, and host specificity in a rodent community

Jean-Philippe Buffet , Benoit Pisanu , Sylvain Brisse , Sophie Roussel , Benjamin Felix , et al.
PLoS ONE, 2013, 8 (7), ⟨10.1371/journal.pone.0068956⟩
Journal articles hal-02652471v1

Campylobacter coli cultured from the stools of a patient with immunoproliferative small intestinal disease

S. Coeuret , A. de La Blanchardière , V. Saguet-Rysanek , S. Cheze , M. Tavernier , et al.
Clinical Microbiology and Infection, 2014, 20 (9), pp.908-911. ⟨10.1111/1469-0691.12545⟩
Journal articles pasteur-02869792v1

Uncovering Listeria monocytogenes hypervirulence by harnessing its biodiversity

Mylène M Maury , Yu-Huan Tsai , Caroline Charlier , Marie Touchon , Viviane Chenal-Francisque , et al.
Nature Genetics, 2016, 48 (3), pp.308-313. ⟨10.1038/ng.3501⟩
Journal articles pasteur-02170775v1