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Phylogenetic distribution and evolutionary dynamics of nod and T3SS genes in the genus Bradyrhizobium

Albin Teulet , Djamel Gully , Zoe Rouy , Alicia Camuel , Ralf Koebnik , et al.
Microbial Genomics, 2020, 6 (9), ⟨10.1099/mgen.0.000407⟩
Journal articles hal-03127250v1

Specific binding of the Xanthomonas campestris pv. vesicatoria AraC-type transcriptional activator HrpX to plant-inducible promoter boxes.

Ralf Koebnik , Antje Krüger , Frank Thieme , Alexander Urban , Ulla Bonas
Journal of Bacteriology, 2006, 188 (21), pp.7652-60. ⟨10.1128/JB.00795-06⟩
Journal articles hal-00163972v1
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Draft Genome Sequence of the Xanthomonas cassavae Type Strain CFBP 4642.

Stéphanie S. Bolot , Alejandra Munoz Bodnar , Sébastien Cunnac , Erika Ortiz , Boris Szurek , et al.
Genome Announcements, 2013, 1 (4), ⟨10.1128/genomeA.00679-13⟩
Journal articles hal-02642222v1

The Type III-Dependent Hrp Pilus Is Required for Productive Interaction of Xanthomonas campestris pv. vesicatoria with Pepper Host Plants

Ernst Weber , Tuula Ojanen-Reuhs , Elisabeth Huguet , Gerd Hause , Martin Romantschuk , et al.
Journal of Bacteriology, 2005, 187 (7), pp.2458-2468. ⟨10.1128/JB.187.7.2458-2468.2005⟩
Journal articles hal-03622583v1

The TonB-dependent ferrichrome receptor FcuA of Yersinia enterocolitica: evidence against a strict co-evolution of receptor structure and substrate specificity

Ralf Koebnik , Klaus Hantke , Volkmar Braun , Andreas Bäumler , Jürgen Heesemann
Molecular Microbiology, 1993, 7 (3), pp.383-393. ⟨10.1111/j.1365-2958.1993.tb01130.x⟩
Journal articles hal-03620625v1

Comparative genomics and evolution of bacterial type III effectors

Ralf Koebnik , Magdalen Lindeberg
Effectors in Plant–Microbe Interactions, 1, Wiley, 2011, ⟨10.1002/9781119949138.ch3⟩
Book sections hal-03623147v1
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Phenotypic and Molecular-Phylogenetic Analyses Reveal Distinct Features of Crown Gall-Associated Xanthomonas Strains

Hamzeh Mafakheri , S. Mohsen Taghavi , Sadegh Zarei , Touraj Rahimi , Mohammad Sadegh Hasannezhad , et al.
Microbiology Spectrum, 2022, 10 (1), 18 p. ⟨10.1128/spectrum.00577-21⟩
Journal articles hal-03576592v1
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Integrating Science on Xanthomonas and Xylella for Integrated Plant Disease Management

Joana Costa , Joël F Pothier , Jens Boch , Emilio Stefani , Ralf Koebnik
Microorganisms, 2023, 11 (1), pp.6. ⟨10.3390/microorganisms11010006⟩
Journal articles ird-03967356v1
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Functional analysis of African Xanthomonas oryzae pv. oryzae TALomes reveals a new susceptibility gene in bacterial leaf blight of rice

Tuan Tran , Alvaro Pérez-Quintero , Issa Wonni , Sara Carpenter , Yanhua Yu , et al.
PLoS Pathogens, 2018, 14 (6), pp.e1007092. ⟨10.1371/journal.ppat.1007092⟩
Journal articles hal-03626132v1


Carlos Andrés Zárate-Chaves , Corinne Audran , César Augusto Medina Culma , Escalone Aline , Stéphanie Javegny , et al.
ICPP2023, Aug 2023, Lyon, France
Conference papers hal-04208321v1

The molecular interaction between components of the TonB-ExbBD-dependent and of the TolQRA-dependent bacterial uptake systems

Ralf Koebnik
Molecular Microbiology, 1993, 9 (1), pp.219. ⟨10.1111/j.1365-2958.1993.tb01683.x⟩
Journal articles hal-03620634v1

Structural organization of TonB-dependent receptors

Ralf Koebnik
Trends in Microbiology, 1993, 1 (5), pp.201. ⟨10.1016/0966-842X(93)90092-6⟩
Journal articles istex hal-03620636v1

Membrane topology and assembly of the outer membrane protein OmpA of Escherichia coli K12

Georg Ried , Ralf Koebnik , Ingrid Hindennach , Bettina Mutschler , Ulf Henning
Molecular and General Genetics MGG, 1994, 243 (2), pp.127-135. ⟨10.1007/BF00280309⟩
Journal articles istex hal-03620638v1

Structural and Functional Roles of the Surface-Exposed Loops of the β-Barrel Membrane Protein OmpA from Escherichia coli

Ralf Koebnik
Journal of Bacteriology, 1999, 181 (12), pp.3688-3694. ⟨10.1128/JB.181.12.3688-3694.1999⟩
Journal articles hal-03621334v1

Multilocus sequence analysis and type III effector repertoire mining provide new insights into the evolutionary history and virulence of Xanthomonas oryzae

Ahmed Hajri , Chrystelle Brin , Shuai Zhao , Perrine David , Jia-Xu Feng , et al.
Molecular Plant Pathology, 2012, 13 (3), pp.288--302. ⟨10.1111/j.1364-3703.2011.00745.x⟩
Journal articles hal-01199331v1
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Complete Genome Sequence of Xanthomonas campestris pv. campestris SB80, a Race 4 Strain Isolated from White Head Cabbage in Turkey

Songül Erken Meral , Shaheen Bibi , Carlos Andrés Díaz Rodríguez , Jelena Menković , Adriana Bernal , et al.
Microbiology Resource Announcements, 2022, 11 (3), pp.e00022-22. ⟨10.1128/mra.00022-22⟩
Journal articles hal-03626321v1

Evidences for selection on promoter region reveal a hidden aspect of the multifaceted evolution of the type three effector Avrbs2 in the Xanthomonas axonopodis species

P. David , Ahmed Hajri , C Rousseau , Chrystelle Brin , Sophie Bonneau , et al.
International meeting on communication in plants and their responses to the environment, May 2011, ZZ, Unknown Region
Conference papers hal-01202956v1

The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae

M. Arlat , Valérie Barbe , S. Carrere , S. Cociancich , A. Couloux , et al.
2009, 2 p
Other publications hal-00730091v1
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Isolation of atypical wheat-associated xanthomonads in Algeria

Bahria Khenfous-Djebari , Marion Fischer-Le Saux , Mohamed Kerkoud , Traki Benhassine , Zouazi Bouznad , et al.
Phytopathologia Mediterranea, 2019, 58 (3), pp.497-506. ⟨10.13128/Phyto-10855⟩
Journal articles hal-02971104v1

A single cellobiosidase is required for barley hydathode and xylem colonization by Xanthomonas translucens

Aude Cerutti , Alain Jauneau , Marie-Christine Auriac , J. Butchacas , E. Gluck-Thaler , et al.
18. Congress of International-Society-for-Molecular-Plant-Microbe-Interactions (IS-MPMI), International Society for Molecular Plant-Microbe Interactions (IS-MPMI). INT., Jul 2019, Glasgow, United Kingdom
Conference papers hal-02735197v1
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Molecular Epidemiology of Xanthomonas euvesicatoria Strains from the Balkan Peninsula Revealed by a New Multiple-Locus Variable-Number Tandem-Repeat Analysis Scheme

Taca Vancheva , Nevena Bogatzevska , Penka Moncheva , Sasa Mitrev , Christian Vernière , et al.
Microorganisms, 2021, 9 (3), pp.536. ⟨10.3390/microorganisms9030536⟩
Journal articles hal-03205487v1

Chapter 18 Outer membrane proteins of Escherichia coli: mechanism of sorting and regulation of synthesis

Ulf Henning , Ralf Koebnik
Bacterial Cell Wall, 27, Elsevier, pp.381-395, 1994, New Comprehensive Biochemistry, ⟨10.1016/S0167-7306(08)60421-4⟩
Book sections hal-03620642v1

Proposal for a peptidoglycan-associating alpha-helical motif in the C-terminal regions of some bacterial cell-surface proteins

Ralf Koebnik
Molecular Microbiology, 1995, 16 (6), pp.1269-1270. ⟨10.1111/j.1365-2958.1995.tb02348.x⟩
Journal articles hal-03620644v1
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A MLVA genotyping scheme for global surveillance of the citrus pathogen Xanthomonas citri pv. citri suggests a worldwide geographical expansion of a single genetic lineage

Olivier Pruvost , Maxime Magne , Karine Boyer , Alice Leduc , Christophe Tourterel , et al.
PLoS ONE, 2014, 9 (6), pp.e98129. ⟨10.1371/journal.pone.0098129⟩
Journal articles hal-01456735v1
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The Rice DNA-Binding Protein ZBED Controls Stress Regulators and Maintains Disease Resistance After a Mild Drought

Paola A. Zuluaga , Przemyslaw Bidzinski , Emilie Chanclud , Aurélie Ducasse , Bastien Cayrol , et al.
Frontiers in Plant Science, 2020, 11, pp.1265. ⟨10.3389/fpls.2020.01265⟩
Journal articles hal-02927839v1

Tandem repeats as genotyping tools for understanding the genetic structure and epidemiology of #Xanthomonas citri# pv. #citri#

Alice Leduc , Yaya Nadia Traoré , Karine Boyer , Maxime Magne , Pierre Grygiel , et al.
Xanthomonas Genomics Conference 2015, Jul 2015, Bogota, Colombia
Conference papers hal-01456715v1

Surveillance and control of cassava diseases in Africa

Jean-Michel Lett , Michel Roux-Cuvelier , Abdou Azali Hamza , H. Atta Diallo , Larry Beach , et al.
International workshop : Surveillance and control of cassava diseases in Africa, Jun 2014, Saint-Pierre, Réunion. 2014
Poster communications hal-01456754v1
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CRISPRi in Xanthomonas demonstrates functional convergence of transcription activator‐like effectors in two divergent pathogens

Carlos Andrés Zárate-Chaves , Corinne Audran , César Augusto Medina Culma , Aline Escalon , Stéphanie Javegny , et al.
New Phytologist, In press, ⟨10.1111/nph.18808⟩
Journal articles hal-04058189v1

Structure and function of bacterial outer membrane proteins: barrels in a nutshell

Ralf Koebnik , Kaspar Locher , Patrick van Gelder
Molecular Microbiology, 2000, 37 (2), pp.239-253. ⟨10.1046/j.1365-2958.2000.01983.x⟩
Journal articles hal-03621348v1

Extended Sugar Slide Function for the Periplasmic Coiled Coil Domain of ScrY

Fabrice Dumas , Sabine Frank , Ralf Koebnik , Emeline Maillet , Ariel Lustig , et al.
Journal of Molecular Biology, 2000, 300 (4), pp.687-695. ⟨10.1006/jmbi.2000.3897⟩
Journal articles istex hal-03621353v1