Search - Archive ouverte HAL Access content directly

Filter your results

55 Results
Image document

Translation Analysis at the Genome Scale by Ribosome Profiling

Agnès Baudin-Baillieu , Isabelle Hatin , Rachel Legendre , Olivier Namy
Yeast Functional Genomics, pp.105-124, 2016, 9781493930784. ⟨10.1007/978-1-4939-3079-1_7⟩
Book sections hal-01415762v1

VING: a software for visualization of deep sequencing signals.

Marc Descrimes , Yousra Ben Zouari , Maxime Wery , Rachel Legendre , Daniel Gautheret , et al.
BMC Research Notes, 2014, 8 (1), pp.419. ⟨10.1186/s13104-015-1404-5⟩
Journal articles hal-01199649v1
Image document

CD32+CD4+ T Cells Sharing B Cell Properties Increase With Simian Immunodeficiency Virus Replication in Lymphoid Tissues

Nicolas Huot , Philippe Rascle , Cyril Planchais , Vanessa Contreras , Caroline Passaes , et al.
Frontiers in Immunology, 2021, 12, pp.695148. ⟨10.3389/fimmu.2021.695148⟩
Journal articles pasteur-03278887v1
Image document

In Situ Fixation Redefines Quiescence and Early Activation of Skeletal Muscle Stem Cells

Léo Machado , Joana Esteves de Lima , Odile Fabre , Caroline C. Proux , Rachel Legendre , et al.
Cell Reports, 2017, 21 (7), pp.1982-1993. ⟨10.1016/j.celrep.2017.10.080⟩
Journal articles pasteur-02562451v1
Image document

Systemic viral spreading and defective host responses are associated with fatal Lassa fever in macaques

Nicolas Baillet , Stéphanie Reynard , Emeline Perthame , Jimmy Hortion , Alexandra Journeaux , et al.
Communications Biology, 2021, 4 (1), pp.27. ⟨10.1038/s42003-020-01543-7⟩
Journal articles pasteur-03236121v1

Role of the major determinant of polar flagellation FlhG in the endoflagella‐containing spirochete Leptospira

Lenka Fule , Ruben Halifa , Celia Fontana , Odile Sismeiro , Rachel Legendre , et al.
Molecular Microbiology, 2021, ⟨10.1111/mmi.14831⟩
Journal articles pasteur-03411258v1
Image document

Non-specific interference of cobalt with siderophore-dependent iron uptake pathways

Ana Carballido Lopez , Olivier Cunrath , Anne Forster , Julien Pérard , Gwenaëlle Graulier , et al.
Metallomics, 2019, 11 (11), pp.1937-1951. ⟨10.1039/C9MT00195F⟩
Journal articles hal-02955479v1
Image document

Transcytosis subversion by M cell-to-enterocyte spread promotes Shigella flexneri and Listeria monocytogenes intracellular bacterial dissemination

Camille Rey , Yuen-Yan Chang , Patricia Latour-Lambert , Hugo Varet , Caroline Proux , et al.
PLoS Pathogens, 2020, 16 (4), pp.e1008446. ⟨10.1371/journal.ppat.1008446⟩
Journal articles pasteur-02555576v1

GH16 and GH81 family β-(1,3)-glucanases in Aspergillus fumigatus are essential for conidial cell wall morphogenesis.

Isabelle Mouyna , Vishukumar Aimanianda , Lukas Hartl , Marie-Christine Prévost , Odile O. Sismeiro , et al.
Cellular Microbiology, 2016, 18 (9), pp.1285 - 1293. ⟨10.1111/cmi.12630⟩
Journal articles pasteur-01704672v1

RiboTools: a Galaxy toolbox for qualitative ribosome profiling analysis.

Rachel Legendre , Agnès Baudin-Baillieu , Isabelle Hatin , Olivier Namy
Bioinformatics, 2015, pp.2586-8. ⟨10.1093/bioinformatics/btv174⟩
Journal articles hal-01464786v1

Involvement of mitochondrial dysfunction and ER-stress in the physiopathology of equine osteochondritis dissecans (OCD).

Clémence Desjardin , Sophie Chat , Mailys Gilles , Rachel Legendre , Julie Riviere , et al.
Experimental and Molecular Pathology, 2014, 96 (3), epub ahead of print. ⟨10.1016/j.yexmp.2014.03.004⟩
Journal articles hal-00973739v1
Image document

Functional Genomic and Biochemical Analysis Reveals Pleiotropic Effect of Congo Red on Aspergillus fumigatus

Zhonghua Liu , Shriya Raj , Norman van Rhijn , Marcin Fraczek , Jean-Philippe Michel , et al.
mBio, 2021, 12 (3), pp.e00863-21. ⟨10.1128/mbio.00863-21⟩
Journal articles pasteur-03230545v1
Image document

Queuine Is a Nutritional Regulator of Entamoeba histolytica Response to Oxidative Stress and a Virulence Attenuator

Shruti Nagaraja , Maggi W Cai , Jingjing Sun , Hugo Varet , Lotem Sarid , et al.
mBio, 2021, 12 (2), pp.e03549-20. ⟨10.1128/mBio.03549-20⟩
Journal articles pasteur-03165902v1
Image document

Sequanix: a dynamic graphical interface for Snakemake workflows

Dimitri Desvillechabrol , Rachel Legendre , Claire Rioualen , Christiane Bouchier , Jacques van Helden , et al.
Bioinformatics, 2018, 34 (11), pp.1934 - 1936. ⟨10.1093/bioinformatics/bty034⟩
Journal articles hal-01874933v1
Image document

ChIPflow: from raw data to epigenomic dynamics

Maëlle Daunesse , Rachel Legendre , Hugo Varet , Adrien Pain , Claudia Chica
Preprints, Working Papers, ... hal-03254190v2

Design of a custom equine microRNA expression microarray using RNAseq data analysis of various equine tissues

Eric Barrey , Núria Mach , Xavier Mata , Anne Vaiman , Marco Moroldo , et al.
Agilent 1. European Animal and Plant Symposium, Feb 2014, Amsterdam, Netherlands
Conference papers hal-02801791v1
Image document

Next-generation sequencing identifies equine cartilage and subchondral bone miRNAs and suggests their involvement in osteochondrosis physiopathology

Clemence Desjardin , Anne Vaiman , Xavier Mata , Rachel Legendre , Johann Laubier , et al.
BMC Genomics, 2014, 15, ⟨10.1186/1471-2164-15-798⟩
Journal articles hal-01194112v1
Image document

sgDI-tector: defective interfering viral genome bioinformatics for detection of coronavirus subgenomic RNAs

Andrea Di Gioacchino , Rachel Legendre , Yannis Rahou , Valérie Najburg , Pierre Charneau , et al.
RNA, 2021, 28 (3), pp.277-289. ⟨10.1261/rna.078969.121⟩
Journal articles pasteur-03591131v1
Image document

Enzymatic synthesis of random sequences of RNA and RNA analogues by DNA polymerase theta mutants for the generation of aptamer libraries

Irina Randrianjatovo-Gbalou , Sandrine Rosario , Odile Sismeiro , Hugo Varet , Rachel Legendre , et al.
Nucleic Acids Research, 2018, 46 (12), pp.6271-6284. ⟨10.1093/nar/gky413⟩
Journal articles pasteur-02170331v1

Insights into amebiasis using a human 3D-intestinal model

Arturo Aguilar-Rojas , Silvia Castellanos-Castro , Mariette Matondo , Quentin Giai Gianetto , Hugo Varet , et al.
Cellular Microbiology, 2020, pp.e13203. ⟨10.1111/cmi.13203⟩
Journal articles pasteur-02555570v1
Image document

The CovR regulatory network drives the evolution of Group B Streptococcus virulence

Maria-Vittoria Mazzuoli , Maëlle Daunesse , Hugo Varet , Isabelle Rosinski-Chupin , Rachel Legendre , et al.
PLoS Genetics, 2021, 17 (9), pp.e1009761. ⟨10.1371/journal.pgen.1009761⟩
Journal articles pasteur-03349660v1
Image document

Experimental evolution links post-transcriptional regulation to Leishmania fitness gain

Laura Piel , K. Shanmugha Rajan , Giovanni Bussotti , Hugo Varet , Rachel Legendre , et al.
PLoS Pathogens, 2022, 18 (3), pp.e1010375. ⟨10.1371/journal.ppat.1010375⟩
Journal articles pasteur-03615912v1

Profiling of microRNAs coded by mitochondrion in different equine tissues

Núria Mach , Xavier Mata , Marine Beinat , Anne Vaiman , Marco Moroldo , et al.
34. International Society for Animal Genetics Conference, Jul 2014, Xi'an, China
Conference papers hal-01193884v1

MicroRNAs identification and pattern expression in equine skeletal muscles, heart and liver determined by RNA deep sequencing

Xavier Mata , Anne Vaiman , Rachel Legendre , Sylvain Marthey , Denis Laloë , et al.
10. International Equine Genome Mapping Workshop, Dorothy Russell Havemeyer Foundation, Inc. New York, USA., Jul 2013, Furnas, Portugal
Conference papers hal-02745732v1
Image document

Maternal age affects equine day 8 embryo gene expression both in trophoblast and inner cell mass

Emilie Derisoud , Luc Jouneau , Cédric Dubois , Catherine Archilla , Yan Jaszczyszyn , et al.
BMC Genomics, 2022, 23 (1), pp.443. ⟨10.1186/s12864-022-08593-7⟩
Journal articles hal-03695686v2
Image document

SIV-induced terminally differentiated adaptive NK cells in lymph nodes associated with enhanced MHC-E restricted activity

Nicolas Huot , Philippe Rascle , Caroline Petitdemange , Vanessa Contreras , Christina M Stürzel , et al.
Nature Communications, 2021, 12 (1), pp.1282. ⟨10.1038/s41467-021-21402-1⟩
Journal articles pasteur-03162805v1
Image document

Post-transcriptional regulation of Leishmania fitness gain

Laura Piel , K. Shanmugha Rajan , Giovanni Bussotti , Hugo Varet , Rachel Legendre , et al.
Preprints, Working Papers, ... pasteur-03210825v1
Image document

Sequana': a Set of Snakemake NGS pipelines

Thomas Cokelaer , Dimitri Desvillechabrol , Rachel Legendre , Mélissa Cardon
Journal of Open Source Software, 2017, 2 (16), pp.352. ⟨10.21105/joss.00352⟩
Journal articles pasteur-03111935v1

IRF8 regulates efficacy of therapeutic anti‐CD20 monoclonal antibodies

Ludivine Grzelak , Ferdinand Roesch , Amaury Vaysse , Anne Biton , Rachel Legendre , et al.
European Journal of Immunology, 2022, 52 (10), pp.1648-1661. ⟨10.1002/eji.202250037⟩
Journal articles hal-03833626v1
Image document

ePeak: from replicated chromatin profiling data to epigenomic dynamics

Maëlle Daunesse , Rachel Legendre , Hugo Varet , Adrien Pain , Claudia Chica
NAR Genomics and Bioinformatics, 2022, 4 (2), pp.lqac041. ⟨10.1093/nargab/lqac041⟩
Journal articles pasteur-03683990v1