Search - Archive ouverte HAL Access content directly

Filter your results

48 Results
Image document

Calibration plot for proteomics: A graphical tool to visually check the assumptions underlying FDR control in quantitative experiments

Quentin Giai Gianetto , Florence Combes , Claire Ramus , Christophe Bruley , Yohann Coute , et al.
Proteomics, 2016, 16 (1), pp.29-32. ⟨10.1002/pmic.201500189⟩
Journal articles istex hal-02191440v1
Image document

Using a multiomics approach to unravel a septic shock specific signature in skeletal muscle

Baptiste Duceau , Michael Blatzer , Jean Bardon , Thibault Chaze , Quentin Giai Gianetto , et al.
Scientific Reports, 2022, 12 (1), pp.18776. ⟨10.1038/s41598-022-23544-8⟩
Journal articles hal-03996889v1
Image document

In-Depth Characterization of the Clostridioides difficile Phosphoproteome to Identify Ser/Thr Kinase Substrates

Transito Garcia-Garcia , Thibaut Douché , Quentin Giai Gianetto , Sandrine Poncet , Nesrine El Omrani , et al.
Molecular and Cellular Proteomics, 2022, 21, ⟨10.1016/j.mcpro.2022.100428⟩
Journal articles pasteur-04093631v1
Image document

Five simple yet essential steps to correctly estimate the rate of false differentially abundant proteins in mass spectrometry analyses

Samuel Wieczorek , Quentin Giai Gianetto , Thomas Burger
Journal of Proteomics, 2019, 207, pp.103441. ⟨10.1016/j.jprot.2019.103441⟩
Journal articles hal-02267178v1
Image document

Ser/Thr Kinase-Dependent Phosphorylation of the Peptidoglycan Hydrolase CwlA Controls Its Export and Modulates Cell Division in Clostridioides difficile

Transito Garcia-Garcia , Sandrine Poncet , Elodie Cuenot , Thibaut Douché , Quentin Giai Gianetto , et al.
mBio, 2021, 12 (3), pp.e00519-21. ⟨10.1128/mBio.00519-21⟩
Journal articles pasteur-03243540v1
Image document

CYP450 core involvement in multiple resistance strains of Aedes aegypti from French Guiana highlighted by proteomics, molecular and biochemical studies

Yanouk Epelboin , Lanjiao Wang , Quentin Giai Gianetto , Valérie Choumet , Pascal Gaborit , et al.
PLoS ONE, 2021, 16 (1), pp.e0243992. ⟨10.1371/journal.pone.0243992⟩
Journal articles pasteur-03184205v1
Image document

Infection Reveals a Modification of SIRT2 Critical for Chromatin Association

Jorge Vitório Pereira , Christine Chevalier , Thibault Chaze , Quentin Giai Gianetto , Francis Impens , et al.
Cell Reports, 2018, 23 (4), pp.1124 - 1137. ⟨10.1016/j.celrep.2018.03.116⟩
Journal articles pasteur-01857244v1
Image document

A balance between actin and Eps8/IRSp53 utilization in branched versus linear actin networks determines tunneling nanotube formation

J. Michael Henderson , Nina Ljubojevic , Thibault Chaze , Daryl Castaneda , Aude Battistella , et al.
Preprints, Working Papers, ... hal-03871048v1

Testing instantaneous causality in presence of non constant unconditional variance

Quentin Giai Gianetto , Hamdi Raïssi
Journal of Business and Economic Statistics, 2015, 33 (1), pp.46-53. ⟨10.1080/07350015.2014.920614⟩
Journal articles hal-00772479v1
Image document

Mitochondrial fission process 1 (MTFP1) controls bioenergetic efficiency and prevents inflammatory cardiomyopathy and heart failure in mice

Erminia Donnarumma , Michael Kohlhaas , Elodie Vimont , Etienne Kornobis , Thibault Chaze , et al.
Preprints, Working Papers, ... pasteur-03853920v1
Image document

Dynamic Growth and Shrinkage of the Salmonella-Containing Vacuole Determines the Intracellular Pathogen Niche

Virginie Stévenin , Yuen-Yan Chang , Yoann Le Toquin , Magalie Duchateau , Quentin Giai Gianetto , et al.
Cell Reports, 2019, 29 (12), pp.3958-3973.e7. ⟨10.1016/j.celrep.2019.11.049⟩
Journal articles pasteur-02557367v1
Image document

Biological differences between FIM2 and FIM3 fimbriae of Bordetella pertussis: not just the serotype

Soraya Matczak , Valérie Bouchez , Pauline Leroux , Thibaut Douché , Nils Collinet , et al.
Microbes and Infection, 2023, pp.105152. ⟨10.1016/j.micinf.2023.105152⟩
Journal articles pasteur-04109470v1
Image document

The Flemmingsome reveals an ESCRT-to-membrane coupling via ALIX/syntenin/syndecan-4 required for completion of cytokinesis

Cyril Addi , Adrien Presle , Stéphane Frémont , Frédérique Cuvelier , Murielle Rocancourt , et al.
Nature Communications, 2020, 11 (1), pp.1941. ⟨10.1038/s41467-020-15205-z⟩
Journal articles pasteur-02557366v1
Image document

Differentiation-dependent susceptibility of human muscle cells to Zika virus infection

Vincent Legros , Patricia Jeannin , Julien Burlaud-Gaillard , Thibault Chaze , Quentin Giai Gianetto , et al.
PLoS Neglected Tropical Diseases, 2020, 14 (8), pp.e0008282. ⟨10.1371/journal.pntd.0008282⟩
Journal articles hal-03184236v1
Image document

Proteomic Analysis of Humoral Immune Components in Bronchoalveolar Lavage of Patients Infected or Colonized by Aspergillus fumigatus

Sarah Dellière , Magalie Duchateau , Sarah Sze Wah Wong , Quentin Giai Gianetto , Hélène Guegan , et al.
Frontiers in Immunology, 2021, 12, pp.677798. ⟨10.3389/fimmu.2021.677798⟩
Journal articles pasteur-03243511v1
Image document

A peptide-level multiple imputation strategy accounting for the different natures of missing values in proteomics data

Q. Giai Gianetto , S. Wieczorek , Y. Couté , T. Burger
Preprints, Working Papers, ... pasteur-03243577v1
Image document

Using ProteoCombiner to integrate bottom-up and top-down proteomics data to improve proteoform identification

Diogo Borges Lima , Mathieu Dupré , Magalie Duchateau , Quentin Giai Gianetto , Martial Jean-Pierre Rey , et al.
Preprints, Working Papers, ... pasteur-03243560v1
Image document

Amphiregulin mediates non-cell-autonomous effect of senescence on reprogramming

Mathieu von Joest , Cheng Chen , Thibaut Douché , Jeremy Chantrel , Aurélie Chiche , et al.
Cell Reports, 2022, 40 (2), pp.111074. ⟨10.1016/j.celrep.2022.111074⟩
Journal articles pasteur-04093575v1
Image document

Mitochondrial Fission Process 1 controls inner membrane integrity and protects against heart failure

Erminia Donnarumma , Michael Kohlhaas , Elodie Vimont , Etienne Kornobis , Thibault Chaze , et al.
Nature Communications, 2022, 13 (1), pp.6634. ⟨10.1038/s41467-022-34316-3⟩
Journal articles pasteur-03853858v1

Local real-time prediction of turning points in unobserved time-varying risk premia

Quentin Giai Gianetto , Jean-Marc Le Caillec , Erwan Marrec
6th International Finance Conference, Mar 2011, Hammamet, Tunisie
Conference papers hal-00609292v1
Image document

Single locus phosphoproteomics reveals phosphorylation of RPA-1 is required for generation of single-strand DNA following a break at a subtelomeric locus

Emilia Mclaughlin , Annick Dujeancourt-Henry , Thibault Chaze , Quentin Giai Gianetto , Mariette Matondo , et al.
Preprints, Working Papers, ... pasteur-04093539v1
Image document

ProteoCombiner: integrating bottom-up with top-down proteomics data for improved proteoform assessment

Diogo Lima , Mathieu Dupré , Magalie Duchateau , Quentin Giai Gianetto , Martial Jean-Pierre Rey , et al.
Bioinformatics, 2020, pp.btaa958. ⟨10.1093/bioinformatics/btaa958⟩
Journal articles pasteur-03014113v1

Human Immune Response Triggered by Entamoeba histolytica in a 3D-Intestinal Model

Silvia Castellanos-Castro , Arturo Aguilar-Rojas , Mariette I Matondo , Quentin Gian Gianetto , Hugo Varet , et al.
Eukaryome Impact on Human Intestine Homeostasis and Mucosal Immunology, Springer International Publishing, pp.225-238, 2020, ⟨10.1007/978-3-030-44826-4_16⟩
Book sections pasteur-03243649v1
Image document

Interaction network among de novo purine nucleotide biosynthesis enzymes in Escherichia coli

Antoine Gedeon , Gouzel Karimova , Nour Ayoub , Julien Dairou , Quentin Giai Gianetto , et al.
FEBS Journal, 2023, ⟨10.1111/febs.16746⟩
Journal articles pasteur-04092979v1
Image document

Impact of the gut microbiota on the m 6 A epitranscriptome of mouse cecum and liver

Sabrina Jabs , Anne Biton , Christophe Bécavin , Marie-Anne Nahori , Amine Ghozlane , et al.
Nature Communications, 2020, 11, ⟨10.1038/s41467-020-15126-x⟩
Journal articles hal-02573165v1

Uses and misuses of the fudge factor in quantitative discovery proteomics

Quentin Giai Gianetto , Yohann Coute , Christophe Bruley , Thomas Burger
Proteomics, 2016, 16 (14), pp.1955-1960. ⟨10.1002/pmic.201600132⟩
Journal articles hal-02092369v1
Image document

Proteomic analysis of plasma extracellular vesicles reveals mitochondrial stress upon HTLV-1 infection

Patricia Jeannin , Thibault Chaze , Quentin Giai Gianetto , Mariette I Matondo , Olivier Gout , et al.
Scientific Reports, 2018, 8, pp.5170 - 5170. ⟨10.1038/s41598-018-23505-0⟩
Journal articles pasteur-01744767v1
Image document

RadD Contributes to R-Loop Avoidance in Sub-MIC Tobramycin

Veronica Negro , Evelyne Krin , Sebastian Aguilar Pierlé , Thibault Chaze , Quentin Giai Gianetto , et al.
mBio, 2019, 10 (4), pp.e01173-19. ⟨10.1128/mBio.01173-19⟩
Journal articles pasteur-02171194v1
Image document

Bacterial Membrane Vesicles as a Novel Strategy for Extrusion of Antimicrobial Bismuth Drug in Helicobacter pylori

Sumith Kumar , Christine Schmitt , Olivier Gorgette , Martial Marbouty , Magalie Duchateau , et al.
mBio, 2022, 13 (5), pp.e0163322. ⟨10.1128/mbio.01633-22⟩
Journal articles pasteur-04093078v1
Image document

The RBPome of influenza A virus mRNA reveals a role for TDP-43 in viral replication

Maud Dupont , Tim Krischuns , Quentin Giai-Gianetto , Sylvain Paisant , Stefano Bonazza , et al.
Preprints, Working Papers, ... pasteur-04093384v1