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FORK-seq: replication landscape of the Saccharomyces cerevisiae genome by nanopore sequencing
Magali Hennion
,
Jean-Michel Arbona
,
Laurent Lacroix
,
Corinne Cruaud
,
Bertrand Theulot
,
et al.
Journal articles
hal-03055281v1
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Human ORC/MCM density is low in active genes and correlates with replication time but does not delimit initiation zones
Nina Kirstein
,
Alexander Buschle
,
Xia Wu
,
Stefan Krebs
,
Helmut Blum
,
et al.
Journal articles
hal-03442948v1
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Broadening of DNA replication origin usage during metazoan cell differentiation.
Sébastien Dazy
,
Olivier Gandrillon
,
Olivier Hyrien
,
Marie-Noëlle Prioleau
Journal articles
hal-00193779v1
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Organization of DNA replication origin firing in Xenopus egg extracts : the role of intra-S checkpoint
Diletta Ciardo
,
Olivier Haccard
,
Hemalatha Narassimprakash
,
Jean-Michel Arbona
,
Olivier Hyrien
,
et al.
2020
Preprints, Working Papers, ...
hal-02990823v1
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Replication landscape of the human genome
Nataliya Petryk
,
Malik Kahli
,
Yves d'Aubenton-Carafa
,
Yan Jaszczyszyn
,
Yimin Shen
,
et al.
Journal articles
hal-01412672v1
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Prospectively defined patterns of APOBEC3A mutagenesis are prevalent in human cancers
Rachel Deweerd
,
Eszter Németh
,
Ádám Póti
,
Nataliya Petryk
,
Chun-Long Chen
,
et al.
Journal articles
hal-03817515v1
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Dual Roles of Poly(dA:dT) Tracts in Replication Initiation and Fork Collapse
Andres Canela
,
Haiqing Fu
,
Christophe Redon
,
Steven C. Pruitt
,
Yan Jaszczyszyn
,
et al.
Journal articles
hal-02184422v1
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Organization of DNA replication origin firing in Xenopus egg extracts : the role of intra-S checkpoint
Olivier Hyrien
,
Diletta Ciardo
,
Olivier Haccard
,
Hemalatha Narassimprakash
,
Jean-Michel Arbona
,
et al.
2020
Preprints, Working Papers, ...
hal-03052966v1
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Mapping DNA replication with nanopore sequencing
Magali Hennion
,
Jean-Michel Arbona
,
Corinne Cruaud
,
Florence Proux
,
Benoît Le Tallec
,
et al.
Other publications
hal-02410486v1
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FORK-seq: single molecule profiling of DNA replication
Magali Hennion
,
Bertrand Theulot
,
Jean-Michel Arbona
,
B. Audit
,
Olivier Hyrien
Yeast functional genomics: Methods and Protocols, 2477, , pp.107-128, 2022, Methods in Molecular Biology
Book sections
hal-03454731v1
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Genome-wide mapping of individual replication fork velocities using nanopore sequencing
Bertrand Theulot
,
Laurent Lacroix
,
Jean-Michel Arbona
,
Gael A Millot
,
Etienne Jean
,
et al.
Journal articles
pasteur-03693859v1
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Broadening of DNA replication origin usage during metazoan cell differentiation.
Sébastien Dazy
,
Olivier Gandrillon
,
Olivier Hyrien
,
Marie-Noëlle Prioleau
Journal articles
hal-00088647v1
|
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Activation of stage-specific DNA replication origins during metazoan cell differentiation.
S. Dazy
,
O. Gandrillon
,
O. Hyrien
,
Prioleau M.N.
EMBO Reports, 2006, 7, pp.806-811
Journal articles
hal-00124088v1
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A simple and optimized method of producing silanized surfaces for FISH and replication mapping on combed DNA fibers.
H. Labit
,
Goldar a Guilbaud G
,
C. Douarche
,
O. Hyrien
,
K. Marheineke
Biotechniques, 2008, 45(6), pp.649-652, 654, 656-658
Journal articles
hal-00406204v1
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DNA molecular combing-based replication fork directionality profiling
Marion Blin
,
Laurent Lacroix
,
Nataliya Petryk
,
Yan Jaszczyszyn
,
Chun-Long Chen
,
et al.
Journal articles
hal-03195930v1
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Multiscale analysis of genome-wide replication timing profiles using a wavelet-based signal-processing algorithm
Benjamin Audit
,
Antoine Baker
,
Chun-Long Chen
,
Aurélien Rappailles
,
Guillaume Guilbaud
,
et al.
Journal articles
hal-01557077v1
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Evidence for sequential and increasing activation of replication origins along replication timing gradients in the human genome.
Guillaume Guilbaud
,
Aurélien Rappailles
,
Antoine Baker
,
Chun-Long Chen
,
Alain Arneodo
,
et al.
Journal articles
inserm-00691534v1
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DNA replication timing is deterministic at the level of chromosomal domains but stochastic at the level of replicons in Xenopus egg extracts.
H. Labit
,
I. Perewoska
,
T. Germe
,
O. Hyrien
,
K. Marheineke
Nucleic Acids Research, 2008, in press
Journal articles
hal-00333216v1
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Topological analysis of plasmid DNA replication intermediates using two-dimensional agarose gels
O. Hyrien
Methods Mol. Biol., Springer, in press, 2008
Book sections
hal-00333228v1
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Proliferating human cells hypomorphic for Orc2 and pre-RC formation have a defect in p53 activation and CDK2 kinase activation.
Teezr Jk
,
Y. Machida
,
H. Labit
,
O. Novac
,
O. Hyrien
,
et al.
Journal of Biological Chemistry, 2006, 281(10), pp.6253-6260
Journal articles
hal-00090747v1
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FORK-seq: replication landscape of the Saccharomyces cerevisiae genome by nanopore sequencing
Magali Hennion
,
Jean-Michel Arbona
,
Laurent Lacroix
,
Corinne Cruaud
,
Bertrand Theulot
,
et al.
Journal articles
hal-02979039v1
|
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Universal temporal rate of DNA replication origin firing: A balance between origin activation and passivation
Jean-Michel Arbona
,
Arach Goldar
,
Olivier Hyrien
,
Alain Arneodo
,
B. Audit
2018
Preprints, Working Papers, ...
hal-02410505v1
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ATR/Chk1 pathway is essential for resumption of DNA synthesis and cell survival in UV-irradiated XP variant cells
Emmanuelle Despras
,
Fayza Daboussi
,
Olivier Hyrien
,
Kathrin Marheineke
,
Patricia Kannouche
Journal articles
hal-02963047v1
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Deciphering DNA replication dynamics in eukaryotic cell populations in relation with their averaged chromatin conformations OPEN
Arach Goldar
,
A. Arneodo
,
B. Audit
,
Françoise Argoul
,
A. Rappailles
,
et al.
Journal articles
hal-01412574v1
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Visualization of bidirectional initiation of chromosomal DNA replication in a human cell free system.
K. Marheineke
,
O. Hyrien
,
T. Krude
Nucleic Acids Research, 2005, 33(21), pp.6931-6941
Journal articles
hal-00090741v1
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A dynamic stochastic model for DNA replication initiation in early embryos
A. Goldar
,
H. Labit
,
K. Marheineke
,
O. Hyrien
PLoS ONE, 2008, pp.3(8):e2919
Journal articles
hal-00333221v1
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Use of DNA combing to study DNA replication in Xenopus and human cell-free systems
K. Marheineke
,
A. Goldar
,
T. Krude
,
O. Hyrien
Methods Mol. Biol., Springer, pp.521 : 575-603, 2009
Book sections
hal-00333227v1
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Impact of replication timing on non-CpG and CpG substitution rates in mammalian genomes.
Chun-Long Chen
,
Aurélien Rappailles
,
Lauranne Duquenne
,
Maxime Huvet
,
Guillaume Guilbaud
,
et al.
Journal articles
ensl-00517756v1
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Reticulocyte and micronucleated reticulocyte responses to gamma irradiation: dose-response and time-course profiles measured by flow cytometry.
Dertinger Sd
,
Y. Tsai
,
I. Nowak
,
O. Hyrien
,
H. Sun
,
et al.
Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis, 2007, Jul 5, in press
Journal articles
hal-00179051v1
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Neural network and kinetic modelling of human genome replication reveal replication origin locations and strengths
Jean-Michel Arbona
,
Hadi Kabalane
,
Arach Goldar
,
Olivier Hyrien
,
Benjamin Audit
2022
Preprints, Working Papers, ...
hal-03817417v1
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