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Compareads: comparing huge metagenomic experiments
Nicolas Maillet
,
Claire Lemaitre
,
Rayan Chikhi
,
Dominique Lavenier
,
Pierre Peterlongo
et al.
Journal articles
hal-00784394v1
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Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
Daniel Richter
,
Romain Watteaux
,
Thomas Vannier
,
Jade Leconte
,
Paul Frémont
et al.
Journal articles
hal-02399723v1
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Compareads: comparing huge metagenomic experiments
Nicolas Maillet
,
Claire Lemaitre
,
Rayan Chikhi
,
Dominique Lavenier
,
Pierre Peterlongo
et al.
13e édition des Journées Ouvertes en Biologie, Informatique et Mathématiques - JOBIM 2012, Jul 2012, Rennes, France. 2012
Poster communications
hal-00760332v1
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Assemblathon 1: A competitive assessment of de novo short read assembly methods
Dent A. Earl
,
Keith Bradnam
,
John St. John
,
Aaron Darling
,
Dawei Lin
et al.
Journal articles
inria-00637571v1
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Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems
Luigi Caputi
,
Quentin Carradec
,
Damien Eveillard
,
Amos Kirilovsky
,
Eric Pelletier
et al.
Journal articles
hal-02999805v1
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Genome-wide patterns of divergence during speciation: the lake whitefish case study
S. Renaut
,
N. Maillet
,
E. Normandeau
,
C. Sauvage
,
N. Derome
et al.
Philosophical Transactions of the Royal Society B: Biological Sciences, 2012, 367 (1587), pp.354-363. ⟨10.1098/rstb.2011.0197⟩
Journal articles
hal-02612408v1
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COMMET: comparing and combining multiple metagenomic datasets
Nicolas Maillet
,
Guillaume Collet
,
Thomas Vannier
,
Dominique Lavenier
,
Pierre Peterlongo
et al.
IEEE BIBM 2014, Nov 2014, Belfast, United Kingdom
Conference papers
hal-01080050v1
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Compareads: comparing huge metagenomic experiments
Nicolas Maillet
,
Claire Lemaitre
,
Rayan Chikhi
,
Dominique Lavenier
,
Pierre Peterlongo
et al.
RECOMB Comparative Genomics 2012, Oct 2012, Niterói, Brazil
Conference papers
hal-00720951v1
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Rapid Peptides Generator: fast and efficient in silico protein digestion
Nicolas Maillet
Journal articles
hal-02612459v1
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Rapid Peptides Generator: fast and efficient in silico protein digestion. RPG: a fast and efficient software to predict cleaving site of common and novel enzymes
Nicolas Maillet
Jobim - Journées Ouvertes Biologie, Informatique et Mathématiques, Jul 2019, Nantes, France
Poster communications
hal-02612502v1
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Comparaison de novo de données de séquençage issues de très grands échantillons métagénomiques : application sur le projet Tara Oceans
Nicolas Maillet
Theses
tel-00941922v1
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Marine diatoms change their gene expression profile when exposed to microscale turbulence under nutrient replete conditions
Alberto Amato
,
Gianluca Dell’aquila
,
Francesco Musacchia
,
Rossella Annunziata
,
Ari Ugarte
et al.
Journal articles
hal-01528507v1
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
Keith Bradnam
,
Joseph Fass
,
Anton Alexandrov
,
Paul Baranay
,
Michael Bechner
et al.
Journal articles
hal-00868822v1
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Listeriomics: an Interactive Web Platform for Systems Biology of Listeria
Christophe Bécavin
,
Mikael Koutero
,
Nicolas Tchitchek
,
Franck Cerutti
,
Pierre Lechat
et al.
Journal articles
pasteur-01574970v1
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