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An Update on Eukaryotic Viruses Revived from Ancient Permafrost

Jean-Marie Alempic , Audrey Lartigue , Artemiy E Goncharov , Guido Grosse , Jens Strauss , et al.
Viruses, 2023, 15 (2), pp.564. ⟨10.3390/xxxxx⟩
Journal articles hal-04207147v1
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Pandoraviruses: Amoeba Viruses with Genomes Up to 2.5 Mb Reaching That of Parasitic Eukaryotes

Nadège Philippe , Matthieu Legendre , Gabriel Doutre , Yohann Couté , Olivier Poirot , et al.
Science, 2013, 341 (6143), pp.281-286. ⟨10.1126/science.1239181⟩
Journal articles cea-00862677v1
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Unexpected invasion of miniature inverted-repeat transposable elements in viral genomes

Hua-Hao Zhang , Qiu-Zhong Zhou , Ping-Lan Wang , Xiao-Min Xiong , Andréa Luchetti , et al.
Mobile DNA, 2018, 9, pp.19. ⟨10.1186/s13100-018-0125-4⟩
Journal articles hal-01830342v1
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The DNA methylation landscape of giant viruses

Sandra Jeudy , Sofia Rigou , Jean-Marie Alempic , Jean-Michel Claverie , Chantal Abergel , et al.
Nature Communications, 2020, 11 (1), ⟨10.1038/s41467-020-16414-2⟩
Journal articles hal-02634342v1
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Sequence determinants in human polyadenylation site selection.

Matthieu Legendre , Daniel Gautheret
BMC Genomics, 2003, 4 (1), pp.7
Journal articles inserm-00115748v1
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Past and present giant viruses diversity explored through permafrost metagenomics

Sofia Rigou , Sébastien Santini , Chantal Abergel , Jean-Michel Claverie , Matthieu Legendre
Nature Communications, 2022, 13 (1), pp.5853. ⟨10.1038/s41467-022-33633-x⟩
Journal articles hal-03807788v1

H4K44 Acetylation Facilitates Chromatin Accessibility during Meiosis

Matthieu Legendre , Audrey Lartigue , Lionel Bertaux , Sandra Jeudy , Julia Bartoli , et al.
Cell Reports, 2015, 13 (9), pp.1772-1780. ⟨10.1016/j.celrep.2015.10.070⟩
Journal articles hal-02193350v1
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Evolution of giant pandoravirus revealed by CRISPR/Cas9

Hugo Bisio , Matthieu Legendre , Claire Giry , Nadege Philippe , Jean-Marie Alempic , et al.
Nature Communications, 2023, 14 (1), pp.428. ⟨10.1038/s41467-023-36145-4⟩
Journal articles hal-03962773v1
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L’épigénome des virus géants

Matthieu Legendre
Médecine/Sciences, 2020, 36 (10), pp.838-840. ⟨10.1051/medsci/2020149⟩
Journal articles hal-02960797v1
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Comparative Analysis of the Circular and Highly Asymmetrical Marseilleviridae Genomes

Léo Blanca , Eugène Christo-Foroux , Sofia Rigou , Matthieu Legendre
Viruses, 2020, 12 (11), pp.1270. ⟨10.3390/v12111270⟩
Journal articles hal-03001590v1

Evolutionary history of the transposon-invaded Pithoviridae genomes

Sofia Rigou , Alain Schmitt , Jean-Marie Alempic , Audrey Lartigue , Peter Vendloczki , et al.
Preprints, Working Papers, ... hal-04021323v1
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Pandoravirus Celtis Illustrates the Microevolution Processes at Work in the Giant Pandoraviridae Genomes

Matthieu Legendre , Jean-Marie Alempic , Nadège Philippe , Audrey Lartigue , Sandra Jeudy , et al.
Frontiers in Microbiology, 2019, 10, pp.430. ⟨10.3389/fmicb.2019.00430⟩
Journal articles hal-02135607v1
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Exploration of the propagation of transpovirons within Mimiviridae reveals a unique example of commensalism in the viral world

Sandra Jeudy , Lionel Bertaux , Jean-Marie Alempic , Audrey Lartigue , Matthieu Legendre , et al.
Journal articles hal-02409597v1
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Characterization of Mollivirus kamchatka , the first modern representative of the proposed Molliviridae family of giant viruses.

Eugene Christo-Foroux , Jean-Marie Alempic , Audrey Lartigue , Sébastien Santini , Karine Labadie , et al.
Journal of Virology, 2020, ⟨10.1101/844274⟩
Journal articles hal-02464533v1
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Unstable Tandem Repeats in Promoters Confer Transcriptional Evolvability

Marcelo D Vinces , Matthieu Legendre , Marina Caldara , Masaki Hagihara , Kevin J Verstrepen
Science, 2009, 324 (5931), pp.1213-1216. ⟨10.1126/science.1170097⟩
Journal articles hal-02329186v1
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Past and present giant viruses diversity explored through permafrost metagenomics

Sofia Rigou , Sébastien Santini , Chantal Abergel , Jean-Michel Claverie , Matthieu Legendre
Preprints, Working Papers, ... hal-03810478v1
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Des virus géants créateurs de leurs propres gènes ?

Jean-Michel Claverie , Chantal Abergel , Matthieu Legendre
Médecine/Sciences, 2018, 34 (12), pp.1087-1091. ⟨10.1051/medsci/2018300⟩
Journal articles hal-01997663v1
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Des virus géants préhistoriques identifiés par métagénomique

Sofia Rigou , Matthieu Legendre
Médecine/Sciences, 2023, 39 (2), pp.107-109. ⟨10.1051/medsci/2023006⟩
Journal articles hal-03995277v1
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Differential repression of alternative transcripts: a screen for miRNA targets.

Matthieu Legendre , William Ritchie , Fabrice Lopez , Daniel Gautheret
PLoS Computational Biology, 2006, 2, pp.e43. ⟨10.1371/journal.pcbi.0020043⟩
Journal articles inserm-00080130v1

In-depth study of Mollivirus sibericum , a new 30,000-y-old giant virus infecting Acanthamoeba

Matthieu Legendre , Audrey Lartigue , Lionel Bertaux , Sandra Jeudy , Julia Bartoli , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2015, 112, pp.E5327 - E5335. ⟨10.1073/pnas.1510795112⟩
Journal articles cea-01825900v1
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Noumeavirus replication relies on a transient remote control of the host nucleus

Elisabeth Fabre , Sandra Jeudy , Sébastien Santini , Matthieu Legendre , Mathieu Trauchessec , et al.
Nature Communications, 2017, 8, pp.15087. ⟨10.1038/ncomms15087⟩
Journal articles hal-01534406v1

Evolution of giant pandoravirus from small icosahedral viruses revealed by CRISPR/Cas9

Hugo Bisio , Matthieu Legendre , Claire Giry , Nadège Philippe , Jean-Marie Alempic , et al.
Preprints, Working Papers, ... hal-03810585v1
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Computing expectation values for RNA motifs using discrete convolutions.

André Lambert , Matthieu Legendre , Jean-Fred Fontaine , Daniel Gautheret
BMC Bioinformatics, 2005, 6, pp.118. ⟨10.1186/1471-2105-6-118⟩
Journal articles inserm-00090525v1
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Diversity and evolution of the emerging $Pandoraviridae$ family

Matthieu Legendre , Elisabeth Fabre , Olivier Poirot , Sandra Jeudy , Audrey Lartigue , et al.
Nature Communications, 2018, 9, pp.2285. ⟨10.1038/s41467-018-04698-4⟩
Journal articles hal-01830344v1
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Genome-Wide Analysis of Heteroduplex DNA in Mismatch Repair–Deficient Yeast Cells Reveals Novel Properties of Meiotic Recombination Pathways

Emmanuelle Martini , Valérie Borde , Matthieu Legendre , Stéphane Audic , Béatrice Regnault , et al.
PLoS Genetics, 2011, 7 (9), pp.e1002305. ⟨10.1371/journal.pgen.1002305⟩
Journal articles hal-01258245v1
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Translation in Giant Viruses: A Unique Mixture of Bacterial and Eukaryotic Termination Schemes

Sandra Jeudy , Chantal Abergel , Jean-Michel Claverie , Matthieu Legendre
PLoS Genetics, 2012, 8 (12), pp.e1003122. ⟨10.1371/journal.pgen.1003122⟩
Journal articles hal-03894282v1

RNA stem-loops: to be or not to be cleaved by RNAse III.

William Ritchie , Matthieu Legendre , Daniel Gautheret
RNA, 2007, 13 (4), pp.457-62. ⟨10.1261/rna.366507⟩
Journal articles hal-00195308v1