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Towards the human intestinal microbiota phylogenetic core

Julien J. Tap , Stanislas S. Mondot , Florence F. Levenez , Eric Pelletier , Christophe C. Caron , et al.
Environmental Microbiology, 2009, 11 (10), pp.2574-2584. ⟨10.1111/j.1462-2920.2009.01982.x⟩
Journal articles istex hal-02667864v1

An integrated catalog of reference genes in the human gut microbiome

Junhua Li , Huijue Jia , Xianghang Cai , Huanzi Zhong , Qiang Feng , et al.
Nature Biotechnology, 2014, 32, pp.834-841. ⟨10.1038/nbt.2942⟩
Journal articles hal-01195478v1

Mucosal healing progression after acute colitis in mice

Sandra Vidal-Lletjos , Mireille M. Andriamihaja , Anne Blais , Marta Grauso , Patricia Lepage , et al.
World Journal of Gastroenterology, 2019, 25 (27), pp.3572-3589. ⟨10.3748/wjg.v25.i27.3572⟩
Journal articles hal-02371551v1

Modulation of the microbiota by oral antibiotics treats immunoglobulin A nephropathy in humanized mice

Jonathan Maurice M Chemouny , Patrick J Gleeson , Lilia Abbad , Gabriella Lauriero , Erwan Boedec , et al.
Nephrology Dialysis Transplantation, 2019, 34 (7), pp.1135-1144. ⟨10.1093/ndt/gfy323⟩
Journal articles hal-02445631v1

A constrained NMF approach to analyze quantitative metagenomic data

Sébastien Raguideau , Béatrice Laroche , Marion Leclerc , Sandra Plancade
IFAC-PapersOnLine, 2016, 49 (26), pp.71-76. ⟨10.1016/j.ifacol.2016.12.105⟩
Journal articles hal-01455859v1
Image document

FiberGrowth Pipeline: A Framework Toward Predicting Fiber-Specific Growth From Human Gut Bacteroidetes Genomes

Bénédicte Colnet , Christian M K Sieber , Fanny Perraudeau , Marion Leclerc
Frontiers in Microbiology, 2021, 12, ⟨10.3389/fmicb.2021.632567⟩
Journal articles hal-03721314v1

Human colon: a complex bioreactor. Conceptual modelling for the anaerobic digestion of the functional trophic chain

Rafael Munoz Tamayo , Jean-Philippe Steyer , Béatrice Laroche , Marion Leclerc
11. World Congress on Anaerobic Digestion, Sep 2007, Brisbane, Australia. 6 p
Conference papers hal-01204246v1
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Four functional profiles for fibre and mucin metabolism in the human gut microbiome

Simon Labarthe , Sandra Plancade , Sébastien Raguideau , Florian Plaza Onate , Emmanuelle Le Chatelier , et al.
Preprints, Working Papers, ... hal-03918193v1

Nitric Oxide impacts human gut microbiota diversity and functionalities

Nalini Ramarao , Cassandre Bedu-Ferrari , Lucie Etienne-Mesmin , Mahendra Mariadassou , Lucie Lebreuilly , et al.
9. Microbiome and probiotics R & D and business collaboration, Oct 2021, Rotterdam, Netherlands
Conference papers hal-03739679v1

Dysbiosis of Fecal Microbiota in Crohn's Disease Patients as Revealed by a Custom Phylogenetic Microarray

Seungha Kang , Stuart E. Denman , Mark Morrison , Zhongtang Yu , Joel Dore , et al.
Inflammatory Bowel Diseases, 2010, 16 (12), pp.2034 - 2042. ⟨10.1002/ibd.21319⟩
Journal articles hal-01204269v1

Physiologie et métabolisme des bactéries acétogènes hydrogénotropes isolées du côlon

Marion Leclerc
Sciences du Vivant [q-bio]. Université Paris Sud - Paris 11, 1997. Français. ⟨NNT : ⟩
Theses tel-02843106v1

Kinetic modelling of lactate utilization and butyrate production by key human colonic bacterial species

Rafael Munoz Tamayo , Béatrice Laroche , Eric Walter , Sylvia Duncan , Harry Flint , et al.
FEMS Microbiology Ecology, 2011, 76 (3), pp.615-624. ⟨10.1111/j.1574-6941.2011.01085.x⟩
Journal articles hal-00655932v1

Hydrogen metabolism by acetogenic bacteria from the human colon

Marion Leclerc , Annick Bernalier , Gérard Donadille , J.P. Grivet
COST 92, workshop, Jun 1995, Espoo, Finland
Conference papers hal-02772457v1

Transcriptional interactions suggest niche segregation among microorganisms in the human gut

Damian Rafal Plichta , Agnieszka Sierakowska Juncker , Marcelo Bertalan , Elizabeth Rettedal , Laurent Gautier , et al.
Nature Microbiology, 2016, 1 (11), pp.1-6. ⟨10.1038/NMICROBIOL.2016.152⟩
Journal articles hal-01533942v1

Transition nutritionnelle, microbiote et santé : dégradation de protéines alimentaires par des espèces dominantes du microbiote intestinal humain

Daphne Jaoui , Damien Mat , Steven Le Feunteun , Martin Beaumont , Francois Blachier , et al.
Journées Francophones de Nutrition, Dec 2014, Bruxelles, Belgique. pp.S164, ⟨10.1016/S0985-0562(14)70826-X⟩
Conference papers hal-01646903v1

Human gut metagenomics: success and limits of the activity-based approaches

Alexandra Tauzin , Elisabeth Laville , Davide Cecchini , Herve Blottiere , Marion Leclerc , et al.
Functional Metagenomics: Tools and Applications, Editions Springer, 2017
Book sections hal-01578268v1

Nitric Oxide Impacts Human Gut Microbiota Diversity and Functionalities

Marion Leclerc , Cassandre Bedu-Ferrari , Lucie Etienne-Mesmin , Mahendra Mariadassou , Lucie Lebreuilly , et al.
mSystems, 2021, 6 (5), ⟨10.1128/mSystems.00558-21⟩
Journal articles hal-03413913v1

Development of high-throughput phenotyping of metagenomic clones from the human gut microbiome for modulation of eukaryotic cell growth

Karine K. Gloux , Marion Leclerc , Harout Iliozer , René L'Haridon , Chaysavanh Manichanh , et al.
Applied and Environmental Microbiology, 2007, 73 (11), pp.3734-3737. ⟨10.1128/AEM.02204-06⟩
Journal articles hal-02660421v1


Rafael Munoz Tamayo , Béatrice Laroche , Eric Walter , Marion Leclerc
Other publications hal-01204255v1

The Microbiota in Inflammatory Bowel Disease

Philippe Marteau , Marion Leclerc , Patricia Lepage , Philippe Seksik , Harry Sokol , et al.
Intestinal Microbiota in Health and Disease, CRC Press, 17 p., 2014, 978-1-4822-2677-5 978-1-4822-2676-8
Book sections hal-02795586v1

Utilizing acetogenic bacteria from the human colon A

Annick Bernalier , A. Willems , Marion Leclerc , M.D. Collins , Violaine Rochet
95. General meeting, May 1995, Washington, United States. n.p
Conference papers hal-02850519v1
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A fibrolytic potential in the human ileum mucosal microbiota revealed by functional metagenomic

Orlane Patrascu , Fabienne Beguet-Crespel , Ludovica Marinelli , Emmanuelle Le Chatelier , Anne-Laure Abraham , et al.
Scientific Reports, 2017, 7, ⟨10.1038/srep40248⟩
Journal articles hal-01606551v1

Highlighting New Phylogenetic Specificities of Crohn's Disease Microbiota

Stanislas S. Mondot , S. S. Kang , J-Pierre J.-P. Furet , D. Aguirre D. A. de Carcer , C. C. Mcsweeney , et al.
Inflammatory Bowel Diseases, 2011, 17 (1), pp.185 - 192. ⟨10.1002/ibd.21436⟩
Journal articles hal-01000994v1
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Bacteriophages: an underestimated role in human and animal health?

Marianne de Paepe , Marion Leclerc , Colin R. Tinsley , Marie Agnes Petit
Frontiers in Cellular and Infection Microbiology, 2014, 4, ⟨10.3389/fcimb.2014.00039⟩
Journal articles hal-01204359v1
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A metagenomic beta-glucuronidase uncovers a core adaptive function of the human intestinal microbiome

Karine K. Gloux , Olivier O. Berteau , Hanane H. El Oumami , Fabienne F. Beguet-Crespel , Marion M. Leclerc , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2011, 108, pp.4539 - 4546. ⟨10.1073/pnas.1000066107⟩
Journal articles hal-01001013v1
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Bacteroides sp. strain D8, the first cholesterol-reducing bacterium isolated from human feces

Philippe Gerard , Pascale Lepercq , Marion Leclerc , Françoise Gavini , Pierre Raibaud , et al.
Applied and Environmental Microbiology, 2007, 73 (18), pp.5742-5749. ⟨10.1128/AEM.02806-06⟩
Journal articles hal-01608615v1

H2/CO2 metabolism in acetogenic bacteria isolated from the human colon

Marion Leclerc , Annick Bernalier , Gérard Donadille , M. Lelait
Anaerobe, 1997, 3, pp.307-315
Journal articles hal-02688525v1

Mathematical modelling of carbohydrate degradation by human colonic microbiota

Rafael Munoz Tamayo , Béatrice Laroche , Eric Walter , Joel Doré , Marion Leclerc
Journal of Theoretical Biology, 2010, 266 (1), pp.189-20. ⟨10.1016/j.jtbi.2010.05.040⟩
Journal articles istex hal-00521148v1

IDEAS: a parameter identification toolbox with symbolic analysis of uncertainty and its application to biological modelling

Rafael Munoz Tamayo , Béatrice Laroche , Marion Leclerc , Eric Walter
15. IFAC Symposium on System Identication (SYSID 2009), Jul 2009, Saint Malo, France. ⟨10.3182/20090706-3-FR-2004.00211⟩
Conference papers hal-01204242v1

Interplay Between Exercise and Gut Microbiome in the Context of Human Health and Performance

Matthieu Clauss , Philippe Gerard , Alexis Mosca , Marion Leclerc
Frontiers in Nutrition, 2021, 8, ⟨10.3389/fnut.2021.637010⟩
Journal articles hal-03736649v1