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Distinct polymer physics principles govern chromatin dynamics in mouse and Drosophila topological domains

Vuthy Ea , Tom Sexton , Thierry Gostan , Laurie Herviou , Marie-Odile Baudement et al.
BMC Genomics, 2015, 16, pp.607. ⟨10.1186/s12864-015-1786-8⟩
Journal articles hal-01212952v1

Linker histones incorporation maintains chromatin fiber plasticity.

Pierre Recouvreux , Christophe Lavelle , Maria Barbi , Natalia Conde E Silva , Eric Le Cam et al.
Biophysical Journal, 2011, 100 (11), pp.2726-35. ⟨10.1016/j.bpj.2011.03.064⟩
Journal articles hal-00625637v1

Right-handed nucleosome: myth or reality?

Christophe Lavelle , Pierre Recouvreux , Hua Wong , Aurélien Bancaud , Jean-Louis Viovy et al.
Cell, 2009, 139 (7), 1216-7; author reply 1217-8. ⟨10.1016/j.cell.2009.12.014⟩
Journal articles hal-00493335v1

How does the chromatin fiber deal with topological constraints?

Maria Barbi , Julien Mozziconacci , Jean-Marc Victor
Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, 2005, 71, pp.031910. ⟨10.1103/PhysRevE.71.031910⟩
Journal articles hal-00012986v1
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Jean-Marc Victor
Preprints, Working Papers, ... hal-02567311v1
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In Silico Single-Molecule Manipulation of DNA with Rigid Body Dynamics

Pascal Carrivain , Maria Barbi , Jean-Marc Victor
PLoS Computational Biology, 2014, 10 (2), ⟨10.1371/journal.pcbi.1003456⟩
Journal articles hal-01342589v1
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High-throughput chromatin motion tracking in living yeast reveals the flexibility of the fiber throughout the genome

Houssam Hajjoul , Julien Mathon , Hubert Ranchon , Pascal Carrivain , Isabelle Goiffon et al.
Genome Research, 2013, 23 (11), pp.1829-1838. ⟨10.1101/gr.157008.113⟩
Journal articles hal-01053149v1
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Chromatin: A tunable spring at work inside chromosomes

Eli Ben-Haïm , Annick Lesne , Jean-Marc Victor
Physical Review E , 2001, 64 (5), pp.051921. ⟨10.1103/PhysRevE.64.051921⟩
Journal articles hal-03206063v1

Intercalation and buckling instability of DNA linker within locked chromatin fiber

Jean-Marc Victor , Eli Ben-Haïm , Annick Lesne
Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, 2002, 66, pp.060901
Journal articles hal-00020299v1
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A single-molecule view of transcription reveals convoys of RNA polymerases and multi-scale bursting

Katjana Tantale , Florian Müller , Alja Kozulic-Pirher , Annick Lesne , Jean-Marc Victor et al.
Nature Communications, 2016, 7, pp.12248. ⟨10.1038/ncomms12248⟩
Journal articles pasteur-01622688v1
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Polymer coil–globule phase transition is a universal folding principle of Drosophila epigenetic domains

Antony Lesage , Vincent Dahirel , Jean-Marc Victor , Maria Barbi
Epigenetics & Chromatin, 2019, 12 (1), ⟨10.1186/s13072-019-0269-6⟩
Journal articles hal-02147100v1

Structural plasticity of single chromatin fibers revealed by torsional manipulation.

Aurélien Bancaud , Natalia Conde E Silva , Maria Barbi , Gaudeline Wagner , Jean-François Allemand et al.
Nature Structural and Molecular Biology, 2006, 13, pp.444-450. ⟨10.1038/nsmb1087⟩
Journal articles hal-00090147v1
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Rouse model with transient intramolecular contacts on a timescale of seconds recapitulates folding and fluctuation of yeast chromosomes

Marius Socol , Renjie Wang , Daniel Jost , Pascal Carrivain , Cédric Vaillant et al.
Nucleic Acids Research, 2019, 47 (12), pp.6195-6207. ⟨10.1093/nar/gkz374⟩
Journal articles hal-02276944v1
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Chromatin topological transitions

Christophe Lavelle , Aurélien Bancaud , Pierre Recouvreux , Maria Barbi , Jean-Marc Victor et al.
Progress of Theoretical Physics Supplement, 2011, 191, pp.30-39
Journal articles hal-01053106v1
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Adaptive elastic properties of chromatin fiber

Eli Ben-Haim , Annick Lesne , Jean-Marc Victor
Physica A: Statistical and Theoretical Physics, 2002, 314 (1-4), pp.592-599. ⟨10.1016/S0378-4371(02)01073-7⟩
Journal articles hal-03206061v1
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Chromatin fiber allostery and the epigenetic code

Annick Lesne , Nicolas Foray , Guy Cathala , Thierry Forné , Hua Wong et al.
Journal of Physics: Condensed Matter, 2015, 27 (6), pp.064114. ⟨10.1088/0953-8984/27/6/064114⟩
Journal articles hal-01110488v1

Nucleosome chiral transition under positive torsional stress in single chromatin fibers.

Aurélien Bancaud , Gaudeline Wagner , Natalia Conde E Silva , Christophe Lavelle , Hua Wong et al.
Molecular Cell, 2007, 27 (1), pp.135-47. ⟨10.1016/j.molcel.2007.05.037⟩
Journal articles hal-00181873v1
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Poisson-Boltzmann for oppositely charged bodies: an explicit derivation

Jean-Marc Victor , Maria Barbi , Fabien Paillusson
Molecular Physics, 2009, 107 (13), pp.1379-1391. ⟨10.1080/00268970902893156⟩
Journal articles hal-00513286v1

The Role of Supercoiling in the Motor Activity of RNA Polymerases

Annick C Lesne , Jean-Marc Victor , Edouard Bertrand , Eugenia Basyuk , Maria Barbi et al.
Methods in Molecular Biology, pp.215-232, 2018, ⟨10.1007/978-1-4939-8556-2_11⟩
Book sections hal-02343520v1
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To Be or to Have Been Lucky, That Is the Question

Antony Lesage , Jean-Marc Victor
Philosophies, 2021, 6 (3), pp.57. ⟨10.3390/philosophies6030057⟩
Journal articles hal-03365948v1

Monte Carlo simulation of a grafted polymer chain confined in a tube

Paul Sotta , Annick Lesne , Jean-Marc Victor
Journal of Chemical Physics, 2000, 112, pp.1565-1573
Journal articles hal-00003915v1
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Mathematical models of radiation action on living cells: From the target theory to the modern approaches. A historical and critical review

Larry Bodgi , Aurélien Canet , Laurent Pujo-Menjouet , Annick Lesne , Jean-Marc Victor et al.
Journal of Theoretical Biology, 2016, 394, pp.93 - 101. ⟨10.1016/j.jtbi.2016.01.018⟩
Journal articles hal-01382777v1
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Finite-Size Conformational Transitions: A Unifying Concept Underlying Chromosome Dynamics

Bertrand R Caré , Pascal Carrivain , Thierry Forné , Jean-Marc Victor , Annick Lesne et al.
Communications in Theoretical Physics, 2014, 62 (4), pp.607-616. ⟨10.1088/0253-6102/62/4/18⟩
Journal articles hal-02948467v1

The condensed chromatin fiber: an allosteric chemo-mechanical machine for signal transduction and genome processing

Annick Lesne , Christophe Becavin , Jean-Marc Victor
Physical Biology, 2012, 9 (1), ⟨10.1088/1478-3975/9/1/013001⟩
Journal articles hal-02644393v1
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Conformational Manipulation of DNA in Nanochannels Using Hydrodynamics

Qihao He , Hubert Ranchon , Pascal Carrivain , Yannick Viero , Joris Lacroix et al.
Macromolecules, 2013, 46 (15), pp.6195-6202. ⟨10.1021/ma400575h⟩
Journal articles hal-01053101v1

Relevance and limitations of crowding, fractal, and polymer models to describe nuclear architecture.

Sébastien Huet , Christophe Lavelle , Hubert Ranchon , Pascal Carrivain , Jean-Marc Victor et al.
International Review of Cell and Molecular Biology, 2014, 307, pp.443-79. ⟨10.1016/B978-0-12-800046-5.00013-8⟩
Journal articles hal-00979005v1
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Contraction and Tumbling Dynamics of DNA in Shear Flows under Confinement Induced by Transverse Viscoelastic Forces

Marius Socol , Hubert Ranchon , Bayan Chami , Antony Lesage , Jean-Marc Victor et al.
Macromolecules, 2019, 52 (4), pp.1843-1852. ⟨10.1021/acs.macromol.8b02184⟩
Journal articles hal-02076283v1