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Concepts et méchodes en phylogénie moléculaire

G. Perrière , C. Brochier-Armanet
incollection, 2010, --, pp.63-65
Journal articles hal-00539266v1

Correspondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequences

G. Perrière , J.R. Lobry , J. Thioulouse
Computer Applications in the Biosciences, 1996, 12, pp.519-524
Journal articles hal-00435036v1

The source of laterally transferred genes in bacterial genomes

Vincent Daubin , E. Lerat , G. Perrière
Genome Biology, 2003, 4, pp.R57.1-R57.12
Journal articles hal-00427389v1

EMGLib: the enhanced microbial genomes library (update 2000)

G. Perrière , P. Bessieres , B. Labedan
Nucleic Acids Research, 2000, 28 (1), pp.68-71. ⟨10.1093/nar/28.1.68⟩
Journal articles hal-00427098v1

Building large knowledge bases in molecular biology

O. Schmeltzer , C. Medigue , P. Uvietta , F. Rechenmann , F. Dorkeld , et al.
In Proceedings of the First International Conference on Intelligent Systems for Molecular Biology, 1993, 1, pp.345-353
Journal articles hal-00698218v1
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The European ribosomal RNA database

Jan Wuyts , Guy Perrière , Yves van de Peer
Nucleic Acids Research, 2004, 32, pp.D101-D103. ⟨10.1093/nar/gkh065⟩
Journal articles hal-00427639v1
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Horizontal Gene Transfer Regulation in Bacteria as a ‘‘Spandrel'' of DNA Repair Mechanisms

Saliou Fall , Anne Mercier , Franck Bertolla , Alexandra Calteau , Laurent Gueguen , et al.
PLoS ONE, 2007, 2 (10), pp.e1055-e1066. ⟨10.1371/journal.pone.0001055⟩
Journal articles halsde-00182457v1

Génomes, protéomes et transcriptomes à foison

G. Perrière
Pour la science, 2013, 433, pp.38--39
Journal articles hal-02282696v1

Concepts et méthodes en phylogénie moléculaire

G. Perrière , Céline Brochier-Armanet
Springer. 2010, 978-2-287-99047-2
Books hal-02091278v1

G+C3 structuring along the genome: a common feature in prokaryotes

Vincent Daubin , G. Perrière
Molecular Biology and Evolution, 2003, 20, pp.471-483
Journal articles hal-00427485v1

The NRSub database: update 1997

G. Perrière , I. Moszer , T. Gojobori
Nucleic Acids Research, 1997, 25, pp.53-56
Journal articles hal-00434989v1

On-line tools for sequence retrieval and multivariate statistics in molecular biology

G. Perrière , J. Thioulouse
Computer Applications in the Biosciences, 1996, 12, pp.63-69
Journal articles hal-00435037v1

Use and misuse of correspondence analysis in codon usage studies

G. Perrière , J. Thioulouse
Nucleic Acids Research, 2002, 30, pp.4548-4555
Journal articles hal-00427295v1
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Update of NUREBASE : nuclear hormone receptor functional genomics

D. Ruau , J. Duarte , T. Ourjdal , Guy Perrière , V. Laudet , et al.
Nucleic Acids Research, 2004, 32, pp.D165-D167
Journal articles hal-02679106v1
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Article 22. Crise du stockage: conserver les molécules d'ADN ou les données informatiques de l'ADN ?

Dominique D. Joly , Guy Perriere
101 Secrets de l'ADN. CNRS Editions, Paris, pp 90-91, pp.90-91, 2019
Book sections hal-02397731v1

Bioinformatics developments for NGS data analysis at PRABI

F. Picard , Guy Perrière
EMBNet.journal, 2011, 17, pp.12
Journal articles hal-02297662v1

NRSub: a non-redundant data base for the Bacillus subtilis genome

G. Perrière , Manolo Gouy , T. Gojobori
Nucleic Acids Research, 1994, 22 (25), pp.5525-5529. ⟨10.1093/nar/22.25.5525⟩
Journal articles hal-00698135v1

Qualité des données NGS : de la séquence aux bases de données

Pierre Peyret , Julie Aubert , Vincent Breton , François Enault , Line Le Gall , et al.
La génomique environnementale, ISTE Editions, 180 p., 2016, 978-1-78405-151-8
Book sections hal-01661251v1

Origin and molecular evolution of receptor tyrosine kinases with immunoglobulin-like domains.

Julien Grassot , Manolo Gouy , Guy Perrière , Guy Mouchiroud
Molecular Biology and Evolution, 2006, 23 (6), pp.1232-41. ⟨10.1093/molbev/msk007⟩
Journal articles hal-00192848v1

Between-group analysis of microarray data

A.C. Culhane , G. Perrière , E.C. Considine , T.G. Cotter , D.G. Higgins
Bioinformatics, 2002, 18, pp.1600-1608
Journal articles hal-00427316v1

Update of NUREBASE: nuclear hormone receptor functional genomics

D. Ruau , J. Duarte , T. Ourjdal , G. Perrière , V. Laudet , et al.
Nucleic Acids Research, 2004, 32, pp.D165-D167
Journal articles hal-00427648v1

HOBACGEN: database system for comparative genomics in bacteria

G. Perrière , L. Duret , Manolo Gouy
Genome Research, 2000, 10, pp.379-385. ⟨10.1101/gr.10.3.379⟩
Journal articles hal-00427099v1

A phylogenomic approach to bacterial phylogeny: evidence of a core of genes sharing a common history

Vincent Daubin , Manolo Gouy , G. Perrière
Genome Research, 2002, 12, pp.1080-1090. ⟨10.1101/gr.187002⟩
Journal articles hal-00427259v1
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Exploring protein space: From hydrolase to ligase by substitution

Nir Hecht , Caroline Monteil , Guy Perriere , Marina Vishkautzan , Eyal Gur
Molecular Biology and Evolution, 2020, ⟨10.1093/molbev/msaa215⟩
Journal articles hal-03046442v1

Analysis of pFQ31 a 8551-bp cryptic plasmid from the symbiotic nitrogen-fixing actinomycete Frankia

C. Lavire , D. Louis , G. Perrière , J. Briolay , P. Normand , et al.
FEMS Microbiology Letters, 2001, 197, pp.111-116. ⟨10.1111/j.1574-6968.2001.tb10591.x⟩
Journal articles hal-00427180v1
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Toward community standards in the quest for orthologs

Christophe Dessimoz , Toni Gabaldon , David Roos , Erik L L Sonnhammer , Javier Herrero , et al.
Bioinformatics, 2012, 28 (6), pp.900-904. ⟨10.1093/bioinformatics/bts050⟩
Journal articles hal-01636872v1

ColiGene: object-centered representation for the study of E coli gene expressivity by sequence analysis

G. Perrière , Christian Gautier
Biochimie, 1993, 75, pp.415-422
Journal articles hal-00698133v1

The Enhanced Microbial Genomes Library

G. Perrière , P. Bessieres , B. Labedan
Nucleic Acids Research, 2000, 27, pp.63-65
Journal articles hal-00427097v1

RTKdb: database of Receptor Tyrosine Kinase

J. Grassot , G. Mouchiroud , G. Perrière
Nucleic Acids Research, 2003, 31, pp.353-358
Journal articles hal-00427432v1
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Repeated horizontal gene transfers triggered parallel evolution of magnetotaxis in two evolutionary divergent lineages of magnetotactic bacteria

Caroline Monteil , Denis Grouzdev , Guy Perriere , Béatrice Alonso , Zoé Rouy , et al.
Journal articles hal-02625381v1