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Harvesting of Prebiotic Fructooligosaccharides by Nonbeneficial Human Gut Bacteria
Zhi Wang
,
Alexandra S. Tauzin
,
Elisabeth Laville
,
Pietro Tedesco
,
Fabien Letisse
,
et al.
Journal articles
hal-02478442v1
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Bacteroidetes use thousands of enzyme combinations to break down glycans
Pascal Lapébie
,
Vincent Lombard
,
Elodie Drula
,
Nicolas Terrapon
,
Bernard Henrissat
Journal articles
hal-02588181v1
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Unraveling the pectinolytic function of Bacteroides xylanisolvens using a RNA-seq approach and mutagenesis
Jordane Despres
,
Evelyne Forano
,
Pascale Lepercq
,
Sophie Comtet-Marre
,
Gregory Jubelin
,
et al.
Journal articles
hal-01439068v1
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Interspecies Competition Impacts Targeted Manipulation of Human Gut Bacteria by Fiber-Derived Glycans
Michael Patnode
,
Zachary Beller
,
Nathan Han
,
Jiye Cheng
,
Samantha Peters
,
et al.
Journal articles
hal-02588032v1
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Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides
Ana R Luis
,
Jonathon Briggs
,
Xiaoyang Zhang
,
Benjamin Farnell
,
Didier Ndeh
,
et al.
Journal articles
hal-02094616v1
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Fitting hidden Markov models of protein domains to a target species: application to Plasmodium falciparum.
Nicolas Terrapon
,
Olivier Gascuel
,
Eric Marechal
,
Laurent Brehelin
Journal articles
hal-00701611v1
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Metabolism of multiple glycosaminoglycans by Bacteroides thetaiotaomicron is orchestrated by a versatile core genetic locus
Didier Ndeh
,
Arnaud Baslé
,
Henrik Strahl
,
Urszula Mcclurgg
,
Bernard Henrissat
,
et al.
Journal articles
hal-03162776v1
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A bioinformatics analysis of 3400 lytic polysaccharide oxidases from family AA9
Nicolas Lenfant
,
Matthieu Hainaut
,
Nicolas Terrapon
,
Elodie Drula
,
Vincent Lombard
,
et al.
Journal articles
hal-01595066v1
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The CAZy Database/the Carbohydrate-Active Enzyme (CAZy) Database: Principles and Usage Guidelines
Nicolas Terrapon
,
Vincent Lombard
,
Elodie Drula
,
Pedro Coutinho
,
Bernard Henrissat
Book sections
hal-03508817v1
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Bioinformatic Analysis of Lytic Polysaccharide Monooxygenases Reveals the Pan-Families Occurrence of Intrinsically Disordered C-Terminal Extensions
Ketty C Tamburrini
,
Nicolas Terrapon
,
Vincent Lombard
,
Bastien Bissaro
,
Sonia Longhi
,
et al.
Journal articles
hal-03431539v1
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How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans
Alan Cartmell
,
Elisabeth Lowe
,
Arnaud Basle
,
Susan Firbank
,
Didier Ndeh
,
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2017, 114 (27), pp.7037-7042. ⟨10.1073/pnas.1704367114⟩
Journal articles
hal-01802836v1
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Recherche de domaines protéiques divergents à l'aide de modèles de Markov cachés : application à Plasmodium falciparum
Nicolas Terrapon
Bio-informatique [q-bio.QM]. Université Montpellier II - Sciences et Techniques du Languedoc, 2010. Français. ⟨NNT : ⟩
Theses
tel-00811835v1
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Genome Features of Asaia sp. W12 Isolated from the Mosquito Anopheles stephensi Reveal Symbiotic Traits
Shicheng Chen
,
Ting Yu
,
Nicolas Terrapon
,
Bernard Henrissat
,
Edward D Walker
Journal articles
hal-03279784v1
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EuPathDomains: The Divergent Domain Database for Eukaryotic Pathogens
Amel Ghouila
,
Nicolas Terrapon
,
Olivier Gascuel
,
Fatma Guerfali
,
Dhafer Laouini
,
et al.
Journal articles
istex
lirmm-00540932v1
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Gut microbiome of the largest living rodent harbors unprecedented enzymatic systems to degrade plant polysaccharides
Lucelia Cabral
,
Gabriela Persinoti
,
Douglas Paixão
,
Marcele Martins
,
Mariana Morais
,
et al.
Journal articles
hal-03589026v1
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A fibrolytic potential in the human ileum mucosal microbiota revealed by functional metagenomic
Orlane Patrascu
,
Fabienne Beguet-Crespel
,
Ludovica Marinelli
,
Emmanuelle Le Chatelier
,
Anne-Laure Abraham
,
et al.
Journal articles
hal-01606551v1
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Identification of divergent protein domains by combining HMM-HMM comparisons and co-occurrence detection
Amel Ghouila
,
Isabelle Florent
,
Fatma Zahra Guerfali
,
Nicolas Terrapon
,
Dhafer Laouini
,
et al.
Journal articles
pasteur-01060276v1
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Functional exploration of the glycoside hydrolase family GH113
Marie Couturier
,
Mélanie Touvrey-Loiodice
,
Nicolas Terrapon
,
Elodie Drula
,
Laurine Buon
,
et al.
Journal articles
hal-03656671v1
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Microbiota-directed fibre activates both targeted and secondary metabolic shifts in the distal gut
Leszek Michalak
,
John Christian Gaby
,
Leidy Lagos
,
Sabina Leanti La Rosa
,
Torgeir Hvidsten
,
et al.
Journal articles
hal-03163522v1
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Unraveling the pectinolytic function of Bacteroides xylanisolvens using a RNA-seq approach and mutagenesis
Jordane Despres
,
Evelyne Forano
,
Pascale Lepercq
,
Sophie Comtet-Marre
,
Gregory Jubelin
,
et al.
Journal articles
hal-01439085v1
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Xylan degradation by the human gut Bacteroides xylanisolvens XB1A(T) involves two distinct gene clusters that are linked at the transcriptional level
Jordane Despres
,
Evelyne Forano
,
Pascale Lepercq
,
Sophie Comtet-Marre
,
Gregory Jubelin
,
et al.
Journal articles
hal-01439065v1
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Comparative genomic analyses reveal diverse virulence factors and antimicrobial resistance mechanisms in clinical Elizabethkingia meningoseptica strains
Jochen Blom
,
Nicolas Terrapon
,
Shicheng Chen
,
Marty Soehnlen
,
Jochen Blom Id
,
et al.
Journal articles
hal-02972534v1
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Unusual active site location and catalytic apparatus in a glycoside hydrolase family
Jose Munoz-Munoz
,
Alan Cartmell
,
Nicolas Terrapon
,
Bernard Henrissat
,
Harry J. Gilbert
Proceedings of the National Academy of Sciences of the United States of America, 2017, 114 (19), pp.4936-4941. ⟨10.1073/pnas.1701130114⟩
Journal articles
hal-01607615v1
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Discovery of novel carbohydrate-active enzymes through the rational exploration of the protein sequences space
William Helbert
,
Laurent Poulet
,
Sophie Drouillard
,
Sophie Mathieu
,
Mélanie Loiodice
,
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2019, 116 (13), pp.6063-6068. ⟨10.1073/pnas.1815791116⟩
Journal articles
hal-02108378v1
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Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
Rekha Seshadri
,
Sinead Leahy
,
Graeme Attwood
,
Koon Hoong Teh
,
Suzanne Lambie
,
et al.
Journal articles
hal-02094598v1
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PULDB: the expanded database of Polysaccharide Utilization Loci
Nicolas Terrapon
,
Vincent Lombard
,
Elodie Drula
,
Pascal Lapébie
,
Saad Al-Masaudi
,
et al.
Journal articles
hal-02094620v1
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Glycoside hydrolase subfamily GH5_57 features a highly redesigned catalytic interface to process complex hetero-β-mannans
Marcele Martins
,
Mariana Morais
,
Gabriela Persinoti
,
Rafael Galinari
,
Li Yu
,
et al.
Journal articles
hal-03982004v1
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Fitting Hidden Markov Models of Protein Domains to a Target Species
Nicolas Terrapon
,
Olivier Gascuel
,
Laurent Brehelin
JOBIM: Journées Ouvertes Biologie, Informatique, Mathématiques, Jun 2011, Paris, France. pp.193-194
Conference papers
lirmm-00725501v1
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Complex pectin metabolism by gut bacteria reveals novel catalytic functions
Didier Ndeh
,
Artur Rogowski
,
Alan Cartmell
,
Ana S. Luis
,
Arnaud Basle
,
et al.
Journal articles
hal-01595600v1
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Automatic prediction of polysaccharide utilization loci in Bacteroidetes species
Nicolas Terrapon
,
Vincent Lombard
,
Harry J. Gilbert
,
Bernard Henrissat
Journal articles
hal-01438994v1
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