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Multinational outbreak of travel-related Salmonella Chester infections in Europe, summers 2014 and 2015

L Fonteneau , N Jourdan da Silva , Laétitia Fabre , P Ashton , M Torpdahl , et al.
Eurosurveillance, 2017, 22 (7), ⟨10.2807/1560-7917.ES.2017.22.7.30463⟩
Journal articles pasteur-01532210v1
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Enteric Bacterial Pathogens in Children with Diarrhea in Niger: Diversity and Antimicrobial Resistance

Céline Langendorf , Simon Le Hello , Aissatou Moumouni , Malika Gouali , Abdoul-Aziz Mamaty , et al.
PLoS ONE, 2015, 10 (3), pp.e0120275. ⟨10.1371/journal.pone.0120275.s004⟩
Journal articles pasteur-01136347v1

Reply to Guy et al.: Support for a bottleneck in the 2011 Escherichia coli O104:H4 outbreak in Germany.

Yonatan H Grad , Marc Lipsitch , Allison D Griggs , Brian J Haas , Terrance P Shea , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (52), pp.E3629-30. ⟨10.1073/pnas.1209419110⟩
Journal articles pasteur-01111336v1

Early Strains of Multidrug-Resistant Salmonella enterica Serovar Kentucky Sequence Type 198 from Southeast Asia Harbor Salmonella Genomic Island 1-J Variants with a Novel Insertion Sequence

Simon Le Hello , François-Xavier Weill , Véronique Guibert , Karine Praud , Axel Cloeckaert , et al.
Antimicrobial Agents and Chemotherapy, 2012, 56 (10), pp.5096-102. ⟨10.1128/AAC.00732-12⟩
Journal articles pasteur-01116037v1
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Foodborne Outbreak and Nonmotile Salmonella enterica Variant, France

Simon Le Hello , Anne Brisabois , Marie Accou-Demartin , Adeline Josse , Muriel Marault , et al.
Emerging Infectious Diseases, 2012, 18 (1), pp.132-134. ⟨10.3201/eid1801.110450⟩
Journal articles pasteur-01118450v1

Rapid Genotyping of Shigella sonnei by Use of Multiplex High-Resolution Melting.

Waleed Mazi , Vartul Sangal , Amir Saeed , Gunnar Sandstrom , François-Xavier Weill , et al.
Journal of Clinical Microbiology, 2015, 53 (7), pp.2389-91. ⟨10.1128/JCM.00874-15⟩
Journal articles pasteur-01179011v1
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Où se place Caen dans le monde de l'E. coli ST131 ?

François Gravey , L Fabre , C. Isnard , M Fines-Guyon , O. Join-Lambert , et al.
38ème Réunion Interdisciplinaire de Chimiothérapie Anti-Infectieuse, Dec 2018, Paris, France. 2018
Poster communications hal-02407019v1
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Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study

Kate Baker , Timothy Dallman , Philip Ashton , Martin Day , Gwenda Hughes , et al.
The Lancet Infectious Diseases, 2015, 15 (8), pp.913-921. ⟨10.1016/S1473-3099(15)00002-X⟩
Journal articles pasteur-02042957v1
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Salmonella enterica serovar Typhi de sensibilité diminuée à la ciprofloxacine

V Gaborieau , François-Xavier Weill , B Marchou
Médecine et Maladies Infectieuses, 2010, 40 (12), pp.691-5. ⟨10.1016/j.medmal.2010.06.009⟩
Journal articles pasteur-01133825v1
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Community-acquired infectious diarrhoea in children under 5 years of age in Dakar, Senegal

Jean-Marie Sire , Benoit Garin , Loïc Chartier , Ndeye Khota Fall , Adama Tall , et al.
Paediatrics and International Child Health, 2013, 33 (3), pp.139-144. ⟨10.1179/2046905512Y.0000000046⟩
Journal articles pasteur-02025043v1
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Salmonella serotypes in reptiles and humans, French Guiana

Noellie Gay , Simon Le Hello , François-Xavier Weill , Benoit de Thoisy , Franck Berger
Veterinary Microbiology, 2014, 170 (1-2), pp.167-71. ⟨10.1016/j.vetmic.2014.01.024⟩
Journal articles pasteur-01104934v1
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Attribution of the French human Salmonellosis cases to the main food-sources according to the type of surveillance data.

J M David , P Sanders , N Bemrah , S A Granier , M Denis , et al.
Preventive Veterinary Medicine, 2013, 110 (1), pp.12-27. ⟨10.1016/j.prevetmed.2013.02.002⟩
Journal articles pasteur-01111002v1

Reptiles in Guadeloupe (French West Indies) are a reservoir of major human Salmonella enterica serovars

Stéphanie Guyomard-Rabenirina , F.X. Weill , Simon Le Hello , Sylvaine Bastian , Franck Berger , et al.
Caribbean Science and Innovation Meeting 2019, Oct 2019, Pointe-à-Pitre (Guadeloupe), France.
Poster communications hal-02425804v1
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Revisiting the Global Epidemiology of Cholera in Conjunction With the Genomics of Vibrio cholerae

Thandavarayan Ramamurthy , Ankur Mutreja , François-Xavier Weill , Bhabatosh Das , Amit Ghosh , et al.
Frontiers in Public Health, 2019, 7, pp.203. ⟨10.3389/fpubh.2019.00203⟩
Journal articles pasteur-02482033v1

Emergence of CTX-M-9 producing multiresistant strains of Salmonella Virchow in poultry in France

Anne Brisabois , F.X. Weill , R. Lailler , Karine Praud , A. Kerouanton , et al.
6. European Congress of Chemotherapy and Infection - 24. Réunion Interdisciplinaire de Chimiothérapie Anti-Infectieuse, Dec 2004, Paris, France
Conference papers hal-02828226v1

Comparative analysis of IncHI2 plasmids carrying bla(CTX-M-2) or bla(CTX-M-9) from Escherichia coli and salmonella enterica strains isolated from poultry and humans

Aurora Garcia Fernandez , Axel Cloeckaert , Alessia Bertini , Karine Praud , Benoît Doublet , et al.
Antimicrobial Agents and Chemotherapy, 2007, 51 (11), pp.4177-4180. ⟨10.1128/AAC.00603-07⟩
Journal articles hal-02656827v1
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Early transmissible ampicillin resistance in zoonotic Salmonella enterica serotype Typhimurium in the late 1950s: a retrospective, whole-genome sequencing study

Alicia Tran-Dien , Simon Le Hello , Christiane Bouchier , François-Xavier Weill
The Lancet Infectious Diseases, 2018, 18 (2), pp.207-214. ⟨10.1016/S1473-3099(17)30705-3⟩
Journal articles pasteur-02019786v1
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A Simple and Robust Statistical Method to Define Genetic Relatedness of Samples Related to Outbreaks at the Genomic Scale – Application to Retrospective Salmonella Foodborne Outbreak Investigations

Nicolas Radomski , Sabrina Cadel-Six , Emeline Cherchame , Arnaud Felten , Pauline Barbet , et al.
Frontiers in Microbiology, 2019, 10, pp.2413. ⟨10.3389/fmicb.2019.02413⟩
Journal articles pasteur-02481757v1

Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events

Vanessa Wong , Stephen Baker , Derek Pickard , Julian Parkhill , Andrew Page , et al.
Nature Genetics, 2015, 47 (6), pp.632-639. ⟨10.1038/ng.3281⟩
Journal articles pasteur-02043698v1
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Global phylogenomics of multidrug resistant Salmonella enterica serotype Kentucky ST198

Jane Hawkey , Simon Le Hello , Benoît Doublet , Sophie Granier , Rene S Hendriksen , et al.
2019
Preprints, Working Papers, ... pasteur-02079525v1
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Multidrug-Resistant Salmonella enterica Serotype Typhi, Gulf of Guinea Region, Africa

Maria Pardos de La Gandara , Murielle Baltazar , Antoinette Ngandjio , Kathryn Elizabeth Holt , Elodie Lepillet , et al.
Emerging Infectious Diseases, 2015, 21 (4), pp.655-659. ⟨10.3201/eid2104.141355⟩
Journal articles pasteur-01134243v1
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Genomic analysis of Salmonella enterica serotype Paratyphi A during an outbreak in Cambodia, 2013-2015.

Laura Maria Francisca Kuijpers , Simon Le Hello , Nizar Fawal , Laetitia Fabre , Mathieu Tourdjman , et al.
Microbial Genomics, 2016, 2 (11), pp.e000092. ⟨10.1099/mgen.0.000092⟩
Journal articles pasteur-01523637v1
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Global Genomic Epidemiology of Salmonella enterica Serovar Typhimurium DT104.

Pimlapas Leekitcharoenphon , Rene S Hendriksen , Simon Le Hello , François-Xavier Weill , Dorte Lau Baggesen , et al.
Applied and Environmental Microbiology, 2016, 82 (8), pp.2516-26. ⟨10.1128/AEM.03821-15⟩
Journal articles pasteur-01421019v1
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Investigation of an international outbreak of multidrug-resistant monophasic Salmonella Typhimurium associated with chocolate products, EU/EEA and United Kingdom, February to April 2022

Lesley Larkin , Maria Pardos de la Gandara , Ann Hoban , Caisey Pulford , Nathalie Jourdan-da Silva , et al.
Eurosurveillance, 2022, 27 (15), pp.2200314. ⟨10.2807/1560-7917.es.2022.27.15.2200314⟩
Journal articles pasteur-03694284v1

Global phylogeny of Shigella sonnei strains from limited single nucleotide polymorphisms (SNPs) and development of a rapid and cost-effective SNP-typing scheme for strain identification by high-resolution melting analysis

Vartul Sangal , Kathryn E. Holt , Jianfeng Yuan , Derek J Brown , Ingrid Filliol-Toutain , et al.
Journal of Clinical Microbiology, 2013, 51 (1), pp.303-305. ⟨10.1128/JCM.02238-12⟩
Journal articles pasteur-01115898v1

The Bayesian microbial subtyping attribution model: robustness to prior information and a proposition

J.M. David , D Guillemot , N Bemrah , A. Thébault , A Brisabois , et al.
Risk Analysis, 2013, 33 (3), pp.397-408. ⟨10.1111/j.1539-6924.2012.01877.x⟩
Journal articles istex pasteur-01112825v1
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Use of multilocus variable-number tandem repeat analysis (MLVA) in eight European countries, 2012.

B A Lindstedt , M Torpdahl , Gilles Vergnaud , S Le Hello , F X Weill , et al.
Eurosurveillance, 2012, 18 (4), pp.20385. ⟨10.2807/ese.18.04.20385-en⟩
Journal articles pasteur-01111429v1

Evolution and Population Structure of Salmonella enterica Serovar Newport

Vartul Sangal , Heather Harbottle , Camila J Mazzoni , Reiner Helmuth , Beatriz Guerra , et al.
The Journal of applied bacteriology, 2010, 192 (24), pp.6465-75. ⟨10.1128/JB.00969-10⟩
Journal articles pasteur-01133818v1
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Emergence of a Globally Dominant IncHI1 Plasmid Type Associated with Multiple Drug Resistant Typhoid

Kathryn E. Holt , Minh Duy Phan , Stephen Baker , Pham Thanh Duy , Tran Vu Thieu Nga , et al.
PLoS Neglected Tropical Diseases, 2011, 5 (7), pp.e1245. ⟨10.1371/journal.pntd.0001245⟩
Journal articles pasteur-01121725v1

Variant Salmonella genomic island 1 antibiotic resistance gene cluster containing a novel 3'-N-aminoglycoside acetyltransferase gene cassette, aac(3)-Id, in Salmonella enterica serovar newport

B. Doublet , F.X. Weill , L. Fabre , E. Chaslus-Dancla , Axel Cloeckaert
Antimicrobial Agents and Chemotherapy, 2004, 48 (10), pp.3806-3812
Journal articles hal-02679111v1