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Apport du séquençage massif à l'étude de la diversité et du fonctionnement des communautés bactériennes

Elisabeth Navarro , Riccardo Scorretti , Timothy M Vogel , Pascal Simonet
ÉVOLUTION ET BIODIVERSITÉ MICROBIENNE IMPACT DU SÉQUENÇAGE DE NOUVELLE GÉNÉRATION, Dec 2009, Paris, France
Conference papers hal-00440051v1
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Genetic diversity of rhizobia and plant growth promoting rhizobacteria of soil under the influence of Piliostigma reticulatum (DC.) Hochst and their impact on shrub growth

Nogaye Niang , Sandrine Demanèche , Ibrahima Ndoye , Elisabeth Navarro , Saliou Fall et al.
African Journal of Agricultural Research, 2018, ⟨10.5897/AJAR2018.13494⟩
Journal articles ird-02497476v1

Etude de la diversité des communautés bactériennes présentes dans les déchets miniers de la région d’Oujda, au Maroc, dans un contexte de réhabilitation de ces sites par phytostabilisation

Ikram Dahmani , Jamal Aurag , Laila Sbabou , Elisabeth Navarro , P. Moulin et al.
Biotechnologie au Service de la Société "BioSeS 2015", Oct 2015, Fès, Maroc
Conference papers hal-02141323v1

MICROBIAL CANNIBALISM IN EXTREME STARVED ENVIRONMENT

Elisabeth Navarro , Riccardo Scorretti , Pascal Simonet , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Conference papers hal-00399177v1

COMPARATIVE ANALYSIS OF MICROARRAY, RISA AND SEQUENCING APPROACHES FOR MICROBIAL COMMUNITY ANALYSES

Sébastien Cecillon , Elisabeth Navarro , Riccardo Scorretti , Jean-Michel Monier , Aurélie Faugier et al.
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Conference papers hal-00399230v1
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Impact of heavy metal contamination on oxidative stress of Eisenia andrei and bacterial community structure in Tunisian mine soil

Iteb Boughattas , Sabrine Hattab , Hamadi Boussetta , Mohamed Banni , Elisabeth Navarro et al.
Environmental Science and Pollution Research, 2017, 24 (22), pp.18083-18095. ⟨10.1007/s11356-017-9449-8⟩
Journal articles ird-02497519v1
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Antibiotic-resistant soil bacteria in transgenic plant fields

Sandrine Demanèche , Hervé Sanguin , John Poté , Elisabeth Navarro , Dominique Bernillon et al.
Proceedings of the National Academy of Sciences of the United States of America, 2008, 105 (10), pp.3957-3962. ⟨10.1073/pnas.0800072105⟩
Journal articles halsde-00259468v1

Microbial sequences retrieved from environmental samples from seasonal Arctic snow and meltwater from Svalbard, Norway

Catherine Larose , Sibel Berger , Christophe P. Ferrari , Elisabeth Navarro , Aurélien Dommergue et al.
Extremophiles, 2010, 14 (2), pp.205-212. ⟨10.1007/s00792-009-0299-2⟩
Journal articles istex hal-00476166v1

SOIL METAGENOMIC: WHERE IS THE DIVERSITY?

Tom Delmont , Florentin Constancias , Sébastien Cecillon , Elisabeth Navarro , Pascal Simonet et al.
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Conference papers hal-00399234v1

RisaAligner software for aligning fluorescence data between Agilent 2100 Bioanalyzer chips: Application to soil microbial community analysis

Elisabeth Navarro , Olivier Fabrègue , Riccardo Scorretti , Jérémy Reboulet , Pascal Simonet et al.
Biotechniques, 2015, 59 (6), pp.347-358. ⟨10.2144/000114363⟩
Journal articles hal-01245371v1

HOW MICROBIAL COMMUNITY STRUCTURE AND FUNCTION RELATE TO EACH OTHER WHEN CHLORINATED COMPOUNDS ARE INVOLVED

Maude M. David , Margaux Mesle , Cédric Malandain , Sébastien Cecillon , Elisabeth Navarro et al.
The 12th International Symposium on Microbial Ecology (ISME 12), Aug 2008, Caims, Australia
Conference papers hal-00399439v1
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Evolution of Frankia-Casuarinaceae interactions

Elisabeth Navarro , Carole Rouvier , Philippe Normand , Anne Marie Domenach , Pascal Simonet et al.
Genetics Selection Evolution, 1998, 30 (Suppl), pp.S357-S372
Journal articles hal-00894250v1
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THE DIVERSITY OF CULTIVABLE HYDROCARBON-DEGRADING BACTERIA ISOLATED FROM CRUDE OIL CONTAMINATED SOIL AND SLUDGE FROM ARZEW REFINERY IN ALGERIA

Sonia Sekkour , Abdelkader Bekki , Zoulikha Bouchiba , Timothy M Vogel , Elisabeth Navarro et al.
Journal of Microbiology, Biotechnology and Food Sciences, 2019, 9 (1), pp.70-77. ⟨10.15414/jmbfs.2019.9.1.70-77⟩
Journal articles ird-02497490v1

Etude des interactions plantes-microorganismes dans un contexte de réhabilitation de sites miniers: mécanismes adaptatifs et effets sur le devenir des polluants métalliques

Odile Bruneel , Ikram Dahmani , S. Sbabou , M. Oubohssaine , Yassir Idir et al.
Séminaire EC2CO de restitution et de prospective de l'AT Ecodyn, 2015, ?, France
Conference papers hal-02143131v1

METAGENOMIC: INSIGHTS ON EXTREME METABOLISM

Elisabeth Navarro , Riccardo Scorretti , Aurélie Faugier , Timothy M Vogel
The 12th International Symposium on Microbial Ecology (ISME 12), Aug 2008, Caims, Australia
Conference papers hal-00399436v1

COMPLETE SEQUENCING OF THE SOIL METAGENOME: AN ATTAINABLE UTOPIA?

Pascal Simonet , Elisabeth Navarro , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology - Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Conference papers hal-00399175v1

Biofertilisation des sols et développement durable en Afrique. Study of diversity using next generation sequencing

Odile Bruneel , Aurelie Volant , I. Dahmani , L. Sbabou , Elisabeth Navarro et al.
4ème Congrès de l'Association Marocaine de Microbiologie (AMM) et 16ème Congrès de l'Association Africaine pour la Fixation Biologique de l'azote (AABNF), Université Mohammed V, Nov 2014, Rabat, Morocco
Conference papers hal-02064972v1

GEOMICROBIOLOGY OF EXTREME SOILS

Cédric Malandain , Jean-Paul Ambrosi , Elodie Vicini , Sébastien Cecillon , Timothy M Vogel et al.
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Conference papers hal-00399260v1

Evaluation of functional gene enrichment in a soil metagenomic clone library

Sandrine Demanèche , Maude M. David , Elisabeth Navarro , Pascal Simonet , Timothy M Vogel et al.
Journal of Microbiological Methods, 2009, 76 (1), pp.105-107. ⟨10.1016/j.mimet.2008.09.009⟩
Journal articles hal-00368291v1

Extracellular plant DNA in Geneva groundwater and traditional artesian drinking water fountains

John Poté , Patrick Mavingui , Elisabeth Navarro , Walter Rosselli , Walter Wildi et al.
Chemosphere, 2009, 75 (4), pp.498-504. ⟨10.1016/j.chemosphere.2008.12.048⟩
Journal articles hal-00368906v1

Geomicrobiology of extreme soils along a transect-slope

Cédric Malandain , Jean-Paul Ambrosi , Elodie Vicini , Sébastien Cecillon , Timothy M Vogel et al.
The 12th International Symposium on Microbial Ecology (ISME 12), Aug 2008, Caims, Australia
Conference papers hal-00399434v1

Effect of anthropisation and revegetation efforts on soil bacterial community structure in Terga sandpit, Algeria

Samia Ighilhariz , Philippe de Lajudie , Abdelkader Bekki , Zohra Ighilhariz , Robin Duponnois et al.
Journal of Biodiversity and Environmental Sciences, 2016, 9 (1), pp.283-296
Journal articles hal-01969961v1

Species richness and phylogenetic diversity comparisons of soil microbial communities affected by nickel-mining and revegetation efforts in New Caledonia

Aude Herrera , Marina Hery , James E.S. Stach , Tanguy Jaffré , Philippe Normand et al.
European Journal of Soil Biology, 2007, 43, pp.130-139. ⟨10.1016/j.ejsobi.2006.12.001⟩
Journal articles istex halsde-00155909v1

Effect of carbon and nitrogen input on the bacterial community structure of Neocaledonian nickel mine spoils

Marina Hery , Aude Herrera , Timothy M. Vogel , Philippe Normand , Elisabeth Navarro et al.
FEMS Microbiology Ecology, 2005, 51 (3), pp.333-340. ⟨10.1016/j.femsec.2004.09.008⟩
Journal articles hal-00140810v1

ASSESSING INTERACTIONS BETWEEN MERCURY AND MICROBIAL POPULATIONS IN THE SNOWPACK: A METAGENOMIC APPROACH

Catherine Larose , Sibel Berger , Christophe P. Ferrari , Elisabeth Navarro , Aurélien Dommergue et al.
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Conference papers hal-00399256v1

Characterization of denitrification gene clusters of soil bacteria via a metagenomic approach

Sandrine Demanèche , Laurent Philippot , Maude M. David , Elisabeth Navarro , Timothy M Vogel et al.
FEMS 2009 – Third Congress of European Microbiologists : Microbes and Man – Interdependence and Future Challenges, Jun 2009, Goteborg, Sweden
Conference papers hal-00411820v1

Characterization of Denitrification Gene Clusters of Soil Bacteria via a Metagenomic Approach

Sandrine Demanèche , Laurent Philippot , Maude M. David , Elisabeth Navarro , Timothy M Vogel et al.
Applied and Environmental Microbiology, 2009, 75 (2), pp.534-537. ⟨10.1128/aem.01706-08⟩
Journal articles hal-00368298v1

COMPARISON BETWEEN TOTAL AND ACTIVE BACTERIAL COMMUNITIES IN SOIL CONTAMINATED BY CHLORINATED COMPOUNDS, USING PYROSEQUENCING AND MICROARRAYS

Maude M. David , Elisabeth Navarro , Janet K. Jansson , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Conference papers hal-00399231v1

ASSESSING DEHALOGENASE ACTIVITIES UTILIZING INTEGRATING QUANTITATIVE PCR AND MICROARRAYS DURING PCE BIOREMEDIATION : THE CONTRUCTION OF A NEW DEGRADATION MODEL

Maude M. David , Sébastien Cecillon , Elisabeth Navarro , Timothy M Vogel
BAGECO 10 : Bacterial Genetics and Ecology – Coexisting on a Changing Planet, Jun 2009, Uppsala, Sweden
Conference papers hal-00399232v1
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COLLOQUE FINAL ANR LIMINAL (4)

Amir Moghani , Aurélie El Hassak Marzorati , Emmanuelle Gallienne , Bénédicte Parvaz Ahmad , Anne Céline Leh et al.
2021
Videos hal-03522885v1