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RNases and Helicases in Gram-Positive Bacteria

Ciaran Condon , Sylvain Durand
Regulating with RNA in Bacteria and Archaea, American Society of Microbiology, pp.37-53, 2018, ⟨10.1128/microbiolspec.RWR-0003-2017⟩
Book sections hal-02328938v1

Chapter 15 Assay of Bacillus subtilis Ribonucleases In Vitro In RNA Turnover in Bacteria, Archaea and Organelles

Ciarán Condon , Olivier Pellegrini , Nathalie Mathy , Lionel Benard , Yulia Redko , et al.
Methods in Enzymology, 2008
Book sections hal-03347810v1
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Mapping of internal monophosphate 5 ends of Bacillus subtilis messenger RNAs and ribosomal RNAs in wild-type and ribonuclease-mutant strains

Jeanne M. Dichiara , Bo Liu , Sabine Figaro , Ciarán Condon , David H. Bechhofer
Nucleic Acids Research, 2016, 44 (7), pp.C. ⟨10.1093/nar/gkw073⟩
Journal articles hal-01327381v1

Structural studies of RNase M5 reveal two-metal-ion supported two-step dsRNA cleavage for 5S rRNA maturation

Stephanie Oerum , Marjorie Catala , Maxime Bourguet , Laetitia Gilet , Pierre Barraud , et al.
RNA Biology, 2021, pp.1-11. ⟨10.1080/15476286.2021.1885896⟩
Journal articles hal-03169718v1
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Assay of Bacillus subtilis ribonuclease activity in vitro

Olivier Pellegrini , Laetitia Gilet , Aude Trinquier , Anastasia Tolcan , Delphine Allouche , et al.
Methods in Molecular Biology: RNA remodeling proteins, Methods and Protocols, In press
Book sections hal-03004822v1
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Three essential ribonucleases-RNase y, J1, and III-control the abundance of a majority of bacillus subtilis mRNAs

Sylvain Durand , Laetitia Gilet , Philippe Bessières , Pierre P. Nicolas , Ciaran Condon
PLoS Genetics, 2012, 8 (3), ⟨10.1371/journal.pgen.1002520⟩
Journal articles hal-02646931v1

Effect of tRNA maturase depletion on the levels and stabilities of ribosome assembly cofactor mRNAs in Bacillus subtilis

Aude Trinquier , Ciarán Condon , Frederique Braun
2022
Preprints, Working Papers, ... hal-03871271v1
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Assay of Bacillus subtilis ribonuclease activity in vivo

Laetitia Gilet , Olivier Pellegrini , Anastasia Tolcan , Delphine Allouche , Sylvain Durand , et al.
Methods in Molecular Biology: RNA remodeling proteins, Methods and Protocols, In press
Book sections hal-03004813v1

sRNA-mediated activation of gene expression by inhibition of 5'-3’ exonucleolytic mRNA degradation

Sylvain Durand , Frédérique Braun , Anne-Catherine Helfer , Pascale Romby , Ciaran Condon
Journal articles hal-02171288v1

Ribosomes initiating translation of the hbs mRNA protect it from 5'-to-3' exoribonucleolytic degradation by RNase J1

Roula Daou-Chabo , Nathalie Mathy , Lionel Benard , Ciarán Condon
Molecular Microbiology, 2009
Journal articles hal-03347823v1

The essential nature of YqfG, a YbeY homologue required for 3′ maturation of Bacillus subtilis 16S ribosomal RNA is suppressed by deletion of RNase R

Kathrin Baumgardt , Laetitia Gilet , Sabine Figaro , Ciaran Condon
Nucleic Acids Research, 2018, 46 (16), pp.8605-8615. ⟨10.1093/nar/gky488⟩
Journal articles hal-02349763v1

Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour

Nathalie Mathy , Agnès Hébert , Peggy Mervelet , Lionel Benard , Audrey Dorleans , et al.
Molecular Microbiology, 2010, 75 (2), pp.489-498. ⟨10.1111/j.1365-2958.2009.07004.x⟩
Journal articles hal-02923482v1

Trz1, the long form RNase Z from yeast, forms a stable heterohexamer with endonuclease Nuc1 and mutarotase

Miao Ma , Ines Li de La Sierra Gallay , Noureddine Lazar , Olivier Pellegrini , Jean Lepault , et al.
Biochemical Journal, 2017, ⟨10.1042/BCJ20170435⟩
Journal articles hal-02390058v1
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The torpedo effect in Bacillus subtilis : RN ase J1 resolves stalled transcription complexes

Michaela Šiková , Jana Wiedermannová , Martin Převorovský , Ivan Barvík , Petra Sudzinová , et al.
EMBO Journal, 2019, 39 (3), ⟨10.15252/embj.2019102500⟩
Journal articles hal-03013047v1
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A nitric oxide regulated small RNA controls expression of genes involved in redox homeostasis in Bacillus subtilis

Sylvain Durand , Frédérique Braun , Efthimia Lioliou , Cédric Romilly , Anne-Catherine Helfer , et al.
PLoS Genetics, 2015, 11 (2), ⟨10.1371/journal.pgen.1004957⟩
Journal articles hal-02636652v1

Chapter 9 In Vitro Assays of 5′ to 3′‐Exoribonuclease Activity In RNA Turnover in Eukaryotes: Nucleases, Pathways and Analysis of mRNA Decay

Olivier Pellegrini , Nathalie Mathy , Ciarán Condon , Lionel Benard
Methods in Enzymology, 2008
Book sections hal-03347787v1
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Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs

Stephanie Oerum , Tom Dendooven , Marjorie Catala , Laetitia Gilet , Clément Dégut , et al.
Molecular Cell, 2020, 80 (2), pp.227-236.e5. ⟨10.1016/j.molcel.2020.09.008⟩
Journal articles hal-03015124v1

Ribosomes initiating translation of the hbs mRNA protect it from 5′-to-3′ exoribonucleolytic degradation by RNase J1

Roula Daou-Chabo , Nathalie Mathy , Lionel Benard , Ciaran Condon
Molecular Microbiology, 2009, 71 (6), pp.1538-1550. ⟨10.1111/j.1365-2958.2009.06620.x⟩
Journal articles hal-02923514v1

Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour

Nathalie Mathy , Agnès M Hébert , Peggy Mervelet , Lionel Benard , Audrey Dorleans , et al.
Molecular Microbiology, 2010, 75 (2), pp.489-498. ⟨10.1111/j.1365-2958.2009.07004.x⟩
Journal articles hal-03347836v1
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The 5S rRNA maturase, ribonuclease M5, is a Toprim domain family member

Frédéric Allemand , Nathalie Mathy , Dominque Brechemier-Baey , Ciarán Condon
Nucleic Acids Research, 2005, 33 (13), pp.4368-4376. ⟨10.1093/nar/gki752⟩
Journal articles hal-03347730v1

Structure of the ubiquitous 3' processing enzyme RNase Z bound to transfer RNA

Inès Li de La Sierra-Gallay , Nathalie Mathy , Olivier Pellegrini , Ciarán Condon
Nature Structural and Molecular Biology, 2006, 13 (4), pp.376-377. ⟨10.1038/nsmb1066⟩
Journal articles istex hal-03347756v1

Regulation of RNA processing and degradation in bacteria

Aude Trinquier , Sylvain Durand , Frédérique Braun , Ciarán Condon
Biochimica et Biophysica Acta - Gene Regulatory Mechanisms , 2020, 1863 (5), pp.194505. ⟨10.1016/j.bbagrm.2020.194505⟩
Journal articles hal-03004764v1

The crystal structure of Trz1, the long form RNase Z from yeast

Miao Ma , Ines Li de la sierra-Gallay , Noureddine Lazar , Olivier Pellegrini , Dominique Durand , et al.
Nucleic Acids Research, 2017, ⟨10.1093/nar/gkx216⟩
Journal articles hal-02390053v1
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Novel regulation from novel interactions: Identification of an RNA sponge that controls the levels, processing and efficacy of the RoxS riboregulator of central metabolism in Bacillus subtilis

Sylvain Durand , Adam Callan-Sidat , Josie Mckeown , Stephen Li , Gergana Kostova , et al.
2019
Preprints, Working Papers, ... hal-02348603v1
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Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis.

Ming Fang , Wencke-Maria Zeisberg , Ciaran Condon , Vasily Ogryzko , Antoine Danchin , et al.
Nucleic Acids Research, 2009, 37 (15), pp.5114-25. ⟨10.1093/nar/gkp527⟩
Journal articles hal-00459936v1
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Transfer RNA Maturation Defects Lead to Inhibition of ribosomal RNA Processing via Synthesis of pppGpp

Aude Trinquier , Jonathan E Ulmer , Laetitia Gilet , Sabine Figaro , Philippe Hammann , et al.
Journal articles hal-02104413v1

TheBacillus subtilis ydcDEoperon encodes an endoribonuclease of the MazF/PemK family and its inhibitor

Olivier Pellegrini , Nathalie Mathy , Arhonda Gogos , Lawrence Shapiro , Ciarán Condon
Molecular Microbiology, 2005
Journal articles hal-03347744v1

5′-to-3′ Exoribonuclease Activity in Bacteria: Role of RNase J1 in rRNA Maturation and 5′ Stability of mRNA

Nathalie Mathy , Lionel Benard , Olivier Pellegrini , Roula Daou-Chabo , Wen Tingyi , et al.
Cell Reports, 2007, 129 (4), pp.681-692. ⟨10.1016/j.cell.2007.02.051⟩
Journal articles hal-03347782v1
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Identification of an RNA sponge that controls the RoxS riboregulator of central metabolism in Bacillus subtilis

Sylvain Durand , Adam Callan-Sidat , Josie Mckeown , Stephen Li , Gergana Kostova , et al.
Nucleic Acids Research, 2021, 49 (11), pp.6399 - 6419. ⟨10.1093/nar/gkab444⟩
Journal articles hal-03404437v1

Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates

Jérémie Piton , Valéry Larue , Yann Thillier , Audrey Dorleans , Olivier Pellegrini , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (22), pp.8858-8863. ⟨10.1073/pnas.1221510110⟩
Journal articles hal-00829351v1