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Influence of stormwater infiltration systems on the structure and the activities of groundwater biofilms: Are the effects restricted to rainy periods?

Yohan Lebon , Simon Navel , Maylis Moro , Jérémy Voisin , Benoit Cournoyer , et al.
Science of the Total Environment, 2021, 755, pp.142451. ⟨10.1016/j.scitotenv.2020.142451⟩
Journal articles hal-03082199v1
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Coalescence of bacterial groups originating from urban runoffs and artificial infiltration systems among aquifer microbiomes

Yannick Colin , Rayan Bouchali , Laurence Marjolet , Romain Marti , Florian Vautrin , et al.
Hydrology and Earth System Sciences, 2020, 24 (9), pp.4257-4273. ⟨10.5194/hess-24-4257-2020⟩
Journal articles hal-02926778v1

Analysis of Frankia evolutionary radiation using glnII sequences

B. Cournoyer , Céline Lavire
FEMS Microbiology Letters, 2006, 177 (1), pp.29-34. ⟨10.1111/j.1574-6968.1999.tb13709.x⟩
Journal articles hal-02569778v1

Progress on the genetics of the N 2-fixing actinorhizal symbiont Frankia

C. Lavire , B. Cournoyer
Plant and Soil, 2003, 254 (1), pp.125-137. ⟨10.1023/A:1024915300030⟩
Journal articles istex hal-02573516v1

In situ micro X-ray absorption near edge structure study of microbiologically reduced selenite (SeO32−)

Phil M. Oger , I. Daniel , B. Cournoyer , A. Simionovici
Spectrochimica Acta Part B: Atomic Spectroscopy, 2004, 59 (10-11), pp.1681-1686. ⟨10.1016/j.sab.2004.07.021⟩
Journal articles istex hal-02123018v1

Evolution du métabolome de Pseudomonas aeruginosa au cours des infections chroniques dans la mucoviscidose

O Moyne , B Cournoyer , F Castelli , Dj Bicout , M Maurin , et al.
18ème Colloque français des jeunes chercheurs en Mucoviscidose, Feb 2017, Paris, France. pp.7
Conference papers hal-02063134v1

Étude longitudinale du métabolome de Pseudomonas aeruginosa au cours des infections pulmonaires chroniques dans la mucoviscidose

O Moyne , B Cournoyer , F Castelli , F Fenaille , P Lamourette , et al.
Conférence de Spectrométrie de Masse, Métabolomique et Fluxomique & Electrophorèse et Analyse Protéomique (SMMAP), Oct 2017, Marne-la-Vallée, France. pp.424, Livret des résumés
Poster communications hal-02063135v1

Rejets d'effluents hospitaliers : évaluation de la persistance environnementale des médicaments et des bactéries pathogènes: La démarche du projet Persist-Env

J. Labanowski , E. Laurent , T. Chonova , Agnes Bouchez , B. Cournoyer , et al.
Techniques Sciences Méthodes , 2016, 6, pp.22-30. ⟨10.1051/tsm/201606022⟩
Journal articles hal-02466014v1

Caractérisation des sédiments d’un bassin de retenue-décantation des eaux pluviales et éléments pour la gestion

Gislain Lipeme Kouyi , Sylvie Barraud , Céline Becouze-Lareure , D. Blaha , Yves Perrodin , et al.
Techniques Sciences Méthodes , 2018, 9, pp.65-75. ⟨10.1051/tsm/201809065⟩
Journal articles hal-02064505v1

Structure and fate of a Pseudomonas aeruginosa population originating from a combined sewer and colonizing a wastewater treatment lagoon

Raphaël Lavenir , Stéphanie M.-C Petit , Nolwenn Alliot , Sébastien Ribun , Laurence Loiseau , et al.
Environmental Science and Pollution Research, 2014, 21 (8), pp.5402-5418. ⟨10.1007/s11356-013-2454-7⟩
Journal articles hal-01010646v1

Antiadhesive properties of glycoclusters against Pseudomonas aeruginosa lung infection.

Amine M. Boukerb , Audric Rousset , Nicolas Galanos , Jean-Baptiste Méar , Marion Thépaut , et al.
Journal of Medicinal Chemistry, 2014, 57 (24), pp.10275-10289. ⟨10.1021/jm500038p⟩
Journal articles hal-01147368v1

Length polymorphism and allele structure of trinucleotide microsatellites in natural accessions of Arabidopsis thaliana

K. Loridon , B. Cournoyer , C. Goubely , A. Depeiges , G. Picard
TAG Theoretical and Applied Genetics, 1998, 97 (4), pp.591-604. ⟨10.1007/s001220050935⟩
Journal articles istex hal-02874483v1

The tpm metabarcoding DNA sequence database for taxonomic allocations using the Mothur and DADA2 bio-informatic tools (Version 2.0.1)

Adrien Pozzi , Rayan Bouchali , Laurence Marjolet , Benoit Cournoyer
Zenodo, 2021
Journal articles hal-03446090v1

Des bactéries pathogènes opportunistes en ville

Benoit Cournoyer , Romain Marti , Emilie Bourgeois , Wessam Galia
101 secrets de l'ADN, CNRS Editions, pp.318-319, 2019, 9-7-822-7112323-7
Book sections hal-02945196v1

Detection and enumeration of Pseudomonas aeruginosa in soil and manure assessed by an ecfX qPCR assay

C. Colinon , A. Deredjian , E. Hien , E. Brothier , L. Bouziri , et al.
Journal of Applied Microbiology, 2013, 114 (6), pp.1734-1749. ⟨10.1111/jam.12189⟩
Journal articles hal-01120116v1

Antibiotic and metal resistance among hospital and outdoor strains of Pseudomonas aeruginosa

A. Deredjian , C. Colinon , E. Brothier , S. Favre-Bonté , B. Cournoyer , et al.
Research in Microbiology, 2011, 162 (7), pp.689-700. ⟨10.1016/j.resmic.2011.06.007⟩
Journal articles istex hal-02540462v1

A tellurite-resistance genetic determinant from phytopathogenic pseudomonads encodes a thiopurine methyltransferase: evidence of a widely-conserved family of methyltransferases

B. Cournoyer , S. Watanabe , A. Vivian
BBA - Gene Structure and Expression, 1998, 1397 (2), pp.161-168. ⟨10.1016/S0167-4781(98)00020-7⟩
Journal articles istex hal-02874485v1

Utilisation de billes de verre comme substrats artificiels pour la caractérisation des communautés microbiennes dans les nappes phréatiques : mise au point méthodologique

Jérémy Voisin , Benoit Cournoyer , Florian Mermillod-Blondin
La Houille Blanche - Revue internationale de l'eau, 2015, 4 (4), pp.52-57. ⟨10.1051/lhb/20150046⟩
Journal articles hal-01459095v1

Insertion sequence evolutionary patterns highlight convergent genetic inactivations and recent genomic island acquisitions among epidemic Burkholderia cenocepacia

Arnault Graindorge , Aymeric Menard , Claire Monnez , Benoit Cournoyer
Journal of Medical Microbiology, 2012, 61 (3), pp.394-409. ⟨10.1099/jmm.0.036822-0⟩
Journal articles halsde-00723394v1

Accumulated sediments in a detention basin: chemical and microbial hazard assessment linked to hydrological processes

C. Sébastian , S. Barraud , Sébastien Ribun , A. Zoropogui , Didier Blaha , et al.
Environmental Science and Pollution Research, 2013, pp.1-12. ⟨10.1007/s11356-013-2397-z⟩
Journal articles hal-02522214v1

Genome Sequence and Annotation of a Human Infection Isolate of Escherichia coli O26:H11 Involved in a Raw Milk Cheese Outbreak

W. Galia , P. Mariani-Kurkdjian , Estelle Loukiadis , S. Blanquet-Diot , F. Leriche , et al.
Genome Announcements, 2015, 3 (1), pp.e01568-14. ⟨10.1128/genomeA.01568-14⟩
Journal articles hal-02487308v1

SIPIBEL data set

Jean-Luc Bertrand-Krajewski , Rémy Bournique , Vivien Lecomte , Noémie Pernin , Laure Wiest , et al.
2021
Other publications hal-03318893v1

Spatio-temporal variations in chemical pollutants found among urban deposits match changes in thiopurine S-methyltransferase-harboring bacteria tracked by the tpm metabarcoding approach

Axel Aigle , Yannick Colin , Rayan Bouchali , Emilie Bourgeois , Romain Marti , et al.
Science of the Total Environment, 2021, 767, pp.145425. ⟨10.1016/j.scitotenv.2021.145425⟩
Journal articles hal-03138206v1

textitBurkholderia graminis sp. nov., a rhizospheric Burkholderia species, and reassessment of [Pseudomonas] phenazinium,[Pseudomonas] pyrrocinia and [Pseudomonas] glathei as Burkholderia

V. Viallard , I. Poirier , B. Cournoyer , J. Haurat , S. Wiebkin , et al.
International Journal of Systematic Bacteriology, 1998, 48 (2), pp.549-563. ⟨10.1099/00207713-48-2-549⟩
Journal articles hal-02874487v1

Radiation and functional specialization of the family-3 glycoside hydrolases

B. Cournoyer , D. Faure
Journal of Molecular Microbiology and Biotechnology, 2003, 5 (3), pp.190-198. ⟨10.1159/000070269⟩
Journal articles hal-02573510v1

RISA-HPLC analysis of lung bacterial colonizers of cystic fibrosis children

S. Nazaret , F. Assade , E. Brothier , A. M. Freydière , G. Bellon , et al.
Journal of Microbiological Methods, 2009, 76 (1), pp.58-69. ⟨10.1016/j.mimet.2008.09.019⟩
Journal articles hal-02555051v1
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Microbial risk assessment of Nocardia cyriacigeorgica in polluted environments, case of urban rainfall water

Florian Vautrin , Petar Pujic , Christian Paquet , Emmanuelle Bergeron , Delphine Mouniée , et al.
Computational and Structural Biotechnology Journal, 2021, 19, pp.384-400. ⟨10.1016/j.csbj.2020.12.017⟩
Journal articles hal-03157072v1
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Genomic rearrangements and functional diversification of Leca and Lecb lectin-coding regions impacting the efficacy of glycomimetics directed against pseudomonas aeruginosa

A.M. Boukerb , A Decor , S Ribun , R Tabaroni , A Rousset , et al.
Frontiers in Microbiology, 2016, 7, pp.811. ⟨10.3389/fmicb.2016.00811⟩
Journal articles hal-01397377v1

Reliability of Pseudomonas aeruginosa semi-automated rep-PCR genotyping in various epidemiological situations

A. Doléans-Jordheim , B. Cournoyer , E. Bergeron , J. Croizé , H. Salord , et al.
European Journal of Clinical Microbiology and Infectious Diseases, 2009, 28 (9), pp.1105-1111. ⟨10.1007/s10096-009-0755-z⟩
Journal articles istex hal-00599572v1

Identification of Stenotrophomonas maltophilia strains isolated from environmental and clinical samples: a rapid and efficient procedure

C. Pinot , A. Deredjian , S. Nazaret , E. Brothier , B. Cournoyer , et al.
Journal of Applied Microbiology, 2011, 111 (5), pp.1185-1193. ⟨10.1111/j.1365-2672.2011.05120.x⟩
Journal articles halsde-00723485v1