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Cryptic XPO1-MLLT10 translocation is associated with HOXA locus deregulation in T-ALL

Salvatore Spicuglia , E. Macintyre , J. Bond , A. Bergon , A. Durand , et al.
Blood, 2014, 124 (19), pp.3023--3025. ⟨10.1182/blood-2014-04-567636⟩
Journal articles hal-01614951v1
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The nature of electron acceptor (MnIV/NO3) triggers differential expression of genes associated with stress and ammonium limitation responses in Shewanella algae C6G3

Axel Aigle , Patricia Bonin , Nicolas Fernandez -Nunez , Béatrice B. Loriod , Sophie Guasco , et al.
FEMS Microbiology Letters, In press, ⟨10.1093/femsle/fny068⟩
Journal articles hal-01766209v1
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CX3CR1 is dysregulated in blood and brain from schizophrenia patients

Aurélie Bergon , Raoul A Belzeaux , Magali A Comte , Florence A Pelletier , Mylène A Hervé , et al.
Schizophrenia Research, 2015, 168 (1-2), pp.434-443. ⟨10.1016/j.schres.2015.08.010⟩
Journal articles hal-01575079v1
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Understanding Human Cerebral Malaria through a Blood Transcriptomic Signature: Evidences for Erythrocyte Alteration, Immune/Inflammatory Dysregulation, and Brain Dysfunction

Sandrine Cabantous , Belco Poudiougou , Aurélie Bergon , Abdoulaye Barry , Aboubacar A Oumar , et al.
Mediators of Inflammation, 2020, 2020, pp.1-15. ⟨10.1155/2020/3280689⟩
Journal articles hal-02898283v1

CD8(+) T Cells from Human Neonates Are Biased toward an Innate Immune Response

Ariel O. Galindo-Albarran , Oscar H. Lopez-Portales , Darely Y. Gutierrez-Reyna , Otoniel Rodriguez-Jorge , Jose Antonio Sanchez-Villanueva , et al.
Cell Reports, 2016, 17 (8), pp.2151-2160. ⟨10.1016/j.celrep.2016.10.056⟩
Journal articles hal-01460128v1

Chromatin-to-nucleoprotamine transition is controlled by the histone H2B variant TH2B.

Emilie Montellier , Fayçal Boussouar , Sophie Rousseaux , Kai Zhang , Thierry Buchou , et al.
Genes and Development, 2013, 27 (15), pp.1680-92
Journal articles hal-01322388v1

Predisposition to treatment response in major depressive episode: A peripheral blood gene coexpression network analysis

Raoul Belzeaux , Chien-Wei Lin , Ying Ding , Aurélie Bergon , El Chérif Ibrahim , et al.
Journal of Psychiatric Research, 2016, 81, pp.119-126. ⟨10.1016/j.jpsychires.2016.07.009⟩
Journal articles hal-01460127v1
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Olfactory Stem Cells, a New Cellular Model for Studying Molecular Mechanisms Underlying Familial Dysautonomia

Nathalie Boone , Béatrice B. Loriod , Aurélie Bergon , Oualid Sbai , Christine Formisano-Tréziny , et al.
PLoS ONE, 2010, 5 (12), pp.e15590. ⟨10.1371/journal.pone.0015590⟩
Journal articles hal-01612145v1
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TranscriptomeBrowser: a powerful and flexible toolbox to explore productively the transcriptional landscape of the Gene Expression Omnibus database

F. Lopez , J. Textoris , A. Bergon , G. Didier , E. Rémy , et al.
PLoS ONE, 2008, 3 (12), pp.e4001. ⟨10.1371/journal.pone.0004001⟩
Journal articles hal-01595819v1
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Divergent transcription is associated with promoters of transcriptional regulators

C. Lepoivre , M. Belhocine , A. Bergon , A. Griffon , M. Yammine , et al.
BMC Genomics, 2013, 14, pp.914. ⟨10.1186/1471-2164-14-914⟩
Journal articles hal-02191624v1

Structurally Flexible Triethanolamine Core PAMAM Dendrimers Are Effective Nanovectors for DNA Transfection in Vitro and in Vivo to the Mouse Thymus

Xiaoxuan Liu , Jiangyu Wu , Miriam Yammine , Jiehua Zhou , Paola Posocco , et al.
Bioconjugate Chemistry, 2011, 22 (12), pp.2461--2473. ⟨10.1021/bc200275g⟩
Journal articles hal-01460316v1
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Transcriptomics Reveal Several Gene Expression Patterns in the Piezophile Desulfovibrio hydrothermalis in Response to Hydrostatic Pressure

Amira Amrani , Aurélie Bergon , Hélène Holota , Christian Tamburini , Marc Garel , et al.
PLoS ONE, 2014, 9 (9), pp.e106831. ⟨10.1371/journal.pone.0106831⟩
Journal articles hal-01628348v1
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ReMap 2022: a database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments

Fayrouz Hammal , Pierre De langen , Aurélie Bergon , Fabrice Lopez , Benoit Ballester
Nucleic Acids Research, 2022, ⟨10.1093/nar/gkab996⟩
Journal articles hal-03433360v1

Sperm mRNAs and microRNAs as candidate markers for the impact of toxicants on human spermatogenesis: an application to tobacco smoking

Catherine Metzler-Guillemain , Genevieve Victorero , Cyrille Lepoivre , Aurélie Bergon , Miriam Yammine , et al.
Systems Biology in Reproductive Medicine, 2015, 61 (3), pp.139--149. ⟨10.3109/19396368.2015.1022835⟩
Journal articles hal-01445195v1

Transcription-Dependent Generation of a Specialized Chromatin Structure at the TCRβ Locus

Joaquin Zacarias-Cabeza , Mohamed Belhocine , Laurent Vanhille , Pierre Cauchy , Frederic Koch , et al.
Journal of Immunology, 2015, 194 (7), pp.3432--3443. ⟨10.4049/jimmunol.1400789⟩
Journal articles hal-01614946v1

Genome-wide analysis of familial dysautonomia and kinetin target genes with patient olfactory ecto-mesenchymal stem cells.

Nathalie Boone , Aurélie Bergon , Béatrice Loriod , Arnaud Devèze , Catherine Nguyen , et al.
Human Mutation, 2012, 33 (3), pp.530-40. ⟨10.1002/humu.22010⟩
Journal articles hal-00701177v1
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Novel Intergenically Spliced Chimera, NFATC3-PLA2G15 , Is Associated with Aggressive T-ALL Biology and Outcome

Jonathan Bond , Christine Tran Quang , Guillaume Hypolite , Mohamed Belhocine , Aurélie Bergon , et al.
Molecular Cancer Research, 2018, ⟨10.1158/1541-7786.MCR-17-0442⟩
Journal articles hal-01716815v1
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ReMap 2020: a database of regulatory regions from an integrative analysis of Human and Arabidopsis DNA-binding sequencing experiments

Jeanne Chèneby , Zacharie Ménétrier , Martin Mestdagh , Thomas Rosnet , Allyssa Douida , et al.
Nucleic Acids Research, 2020, ⟨10.1093/nar/gkz945⟩
Journal articles hal-02351736v1

A Positive Feed-forward Loop Associating EGR1 and PDGFA Promotes Proliferation and Self-renewal in Glioblastoma Stem Cells

Fabrice Lopez , Philipe Paquis , Fabien Almairac , Denys Fontaine , Nathalie Baeza-Kallee , et al.
Journal of Biological Chemistry, 2016, 291 (20), pp.10684-10699. ⟨10.1074/jbc.M116.720698⟩
Journal articles hal-01460121v1

Deciphering the adaptation strategies of Desulfovibrio piezophilus to hydrostatic pressure through metabolic and transcriptional analyses.

Amira Amrani , Jacques van Helden , Aurélie Bergon , Aicha Aouane , Wajdi Ben Hania , et al.
Environmental Microbiology Reports, 2016, 8 (4), pp.520-6. ⟨10.1111/1758-2229.12427⟩
Journal articles istex hal-01410149v1
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TranscriptomeBrowser 3.0 : introducing a new compendium of molecular interactions and a new visualization tool for the study of gene regulatory networks.

Cyrille Lepoivre , Aurélie Bergon , Fabrice Lopez , Narayanan Perumal , Catherine Nguyen , et al.
BMC Bioinformatics, 2012, 13 (1), pp.19. ⟨10.1186/1471-2105-13-19⟩
Journal articles inserm-00676438v1
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Divergent transcription is associated with promoters of transcriptional regulators.

Cyrille Lepoivre , Mohamed Belhocine , Aurélie Bergon , Aurélien Griffon , Miriam Yammine , et al.
BMC Genomics, 2013, 14 (1), pp.914. ⟨10.1186/1471-2164-14-914⟩
Journal articles inserm-00924629v1
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Développement d'outils et méthodes bioinformatiques pour l'étude de l'expression des gènes et de leur régulation. : application aux pathologies

Aurélie Bergon
Bio-Informatique, Biologie Systémique [q-bio.QM]. Aix-marseille université, 2012. Français. ⟨NNT : ⟩
Theses tel-04213658v1
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ERBB2b mRNA isoform encodes a nuclear variant of the ERBB2 oncogene in breast cancer

Guoqiang Hua , Aurélie Bergon , Pierre Cauchy , Brigitte Kahn‐perlès , François Bertucci , et al.
Journal of Cellular Biochemistry, 2020, ⟨10.1002/jcb.29762⟩
Journal articles hal-02897104v1
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Genome-Wide Expression Profiling Deciphers Host Responses Altered during Dengue Shock Syndrome and Reveals the Role of Innate Immunity in Severe Dengue

Stephanie Devignot , Cedric Sapet , Veasna Duong , Aurélie Bergon , Pascal Rihet , et al.
PLoS ONE, 2010, 5 (7), ⟨10.1371/journal.pone.0011671⟩
Journal articles hal-01595911v1
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Translational Identification of Transcriptional Signatures of Major Depression and Antidepressant Response

Mylène Hervé , Aurélie Bergon , Anne-Marie Le Guisquet , Samuel Leman , Julia-Lou Consoloni , et al.
Frontiers in Molecular Neuroscience, 2017, 10, pp.248. ⟨10.3389/fpsyt.2016.00072⟩
Journal articles hal-01575031v1
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Responder and nonresponder patients exhibit different peripheral transcriptional signatures during major depressive episode

Raoul Belzeaux , Aurélie Bergon , Valérie Jeanjean , Béatrice Loriod , Christine Formisano-Tréziny , et al.
Translational Psychiatry, 2012, 2, pp.e185. ⟨10.1038/tp.2012.112⟩
Journal articles hal-01575056v1

Natural killer cells in acute myeloid leukemia patients: from phenotype to transcriptomic analysis

G. Venton , Y. Labiad , J. Colle , A. Fino , S. Afridi , et al.
Immunologic Research, 2016, 64 (5-6), pp.1225-1236. ⟨10.1007/s12026-016-8848-0⟩
Journal articles hal-01460129v1
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Prevalence of Inflammatory Pathways Over Immuno-Tolerance in Peripheral Blood Mononuclear Cells of Recent-Onset Type 1 Diabetes

Aritania Sousa Santos , Edécio Cunha-Neto , Nelson Vinicius Gonfinetti , Fernanda Bernardi Bertonha , Pauline Brochet , et al.
Frontiers in Immunology, 2022, 12, ⟨10.3389/fimmu.2021.765264⟩
Journal articles hal-03566521v1