A detection based framework for systematic analysis of dual color TIRF microscopy
Anatole Chessel
,
Bertrand Cinquin
,
François Waharte
,
Charles Kervrann
,
Jean Salamero
et al.
Focus on Microscopy (FOM'10) , Mar 2010, Shangai, China
Conference papers
inria-00541107v1
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Computer vision and otolith : toward a modelisation of the morphogenesis of accretionary processes
Anatole Chessel
,
Ronan Fablet
,
Frédéric Cao
Journal articles
hal-01764968v1
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A detection-based framework for the analysis of recycling in TIRF microscopy
Anatole Chessel
,
Bertrand Cinquin
,
Sabine Bardin
,
Jérôme Boulanger
,
Jean Salamero
et al.
IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2010) , IEEE Signal Processing Society, Apr 2010, Rotterdam, Netherlands. pp.1281-1284,
⟨10.1109/ISBI.2010.5490230⟩
Conference papers
inria-00541102v1
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Neural Cell Segmentation in Large-Scale 3D Color Fluorescence Microscopy Images for Developemental Neuroscience
F. Nourbakhsh
,
L. Abdeladim
,
S. Clavreul
,
K. Loulier
,
E. Beaurepaire
et al.
Conference papers
hal-01910114v1
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Variational level-set reconstruction of accretionary morphogenesis from images.
Ronan Fablet
,
Sylvain Pujolle
,
Anatole Chessel
,
Abdesslam Benzinou
,
Frédéric Cao
et al.
ICIP 2006 : 13th IEEE International conference on Image Processing , Oct 2006, Atlanta, United States. pp.221 - 224,
⟨10.1109/ICIP.2006.312465⟩
Conference papers
hal-02344289v1
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Reconstructing individual shape histories of fish otoliths : a new image-based tool for otolith growth analysis and modeling
Ronan Fablet
,
Anatole Chessel
,
Sebastien Carbini
,
Abdesslam Benzinou
,
Hélène de Pontual
et al.
Journal articles
hal-00473720v1
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GeNePy3D: a quantitative geometry python toolbox for bioimaging
Minh-Son Phan
,
Anatole Chessel
Journal articles
pasteur-03678857v1
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A maximum likelihood method for lifetime estimation in photon counting-based fluorescence lifetime imaging microscopy
Anatole Chessel
,
François Waharte
,
Jean Salamero
,
Charles Kervrann
EUSIPCO - European Signal Processing Conference , Sep 2013, Marrakech, Morocco. pp.1-5
Conference papers
hal-00931631v1
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Conditional random fields for object and background estimation in fluorescence video-microscopy
Thierry Pecot
,
Anatole Chessel
,
Sabine Bardin
,
Jean Salamero
,
Patrick Bouthemy
et al.
IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2012 , Jun 2009, Boston, MA, United States. pp.734-737
Conference papers
hal-00794876v1
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An Overview of data science uses in bioimage informatics
Anatole Chessel
Journal articles
hal-01760528v1
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Chromatic serial multiphoton microscopy for multicolor imaging of large brain volumes
Lamiae Abdeladim
,
Katherine S. Matho
,
Solène Clavreul
,
Pierre Mahou
,
Jean-Marc Sintes
et al.
Conference papers
hal-02372159v1
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Simultaneous NAD(P)H and FAD fluorescence lifetime microscopy of long UVA–induced metabolic stress in reconstructed human skin
Thi Phuong Lien Ung
,
Seongbin Lim
,
Xavier Solinas
,
Pierre Mahou
,
Anatole Chessel
et al.
Journal articles
hal-03427279v1
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Mechanical cell competition kills cells via induction of lethal p53 levels
Laura Wagstaff
,
Maja Goschorska
,
Kasia Kozyrska
,
Guillaume Duclos
,
Iwo Kucinski
et al.
Journal articles
hal-01327310v1
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Advanced microcopy to study tracking and spatiotemporal organization of intracellular membranes
Bertrand Cinquin
,
Alexandre Gidon
,
Anatole Chessel
,
Thierry Pecot
,
Jérôme Boulanger
et al.
Bio-Medical Materials and Engineering , 2011
Journal articles
inria-00541284v1
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Automated Quantification With Sub-Micrometer Scale Precision In Volumetric Multicolor Multiphoton Microscopy Images
Minh Son Phan
,
Katherine S. Matho
,
Lamiae Abdeladim
,
Jean Livet
,
Emmanuel Beaurepaire
et al.
Conference papers
hal-02372253v1
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EDAM-bioimaging : The ontology of bioimage informatics operations, topics, data, and formats (update 2020)
Matúš Kalaš
,
Laure Plantard
,
Nataša Sladoje
,
Joakim Lindblad
,
Moritz Alexander Kirschmann
et al.
ELIXIR All Hands 2020 , Jun 2020, Virtual, United Kingdom
Poster communications
hal-02910948v1
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EDAM-bioimaging : The ontology of bioimage informatics operations, topics, data, and formats (update 2019)
Matúš Kalaš
,
Laure Plantard
,
Nataša Sladoje
,
Joakim Lindblad
,
Moritz Alexander Kirschmann
et al.
3rd NEUBIAS Bioimage Analysis Community Conference 2019 , Jun 2020, Luxembourg, Luxembourg
Poster communications
hal-02910949v1
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Background Fluorescence Estimation and Vesicle Segmentation in Live Cell Imaging with Conditional Random Fields
Thierry Pécot
,
Patrick Bouthemy
,
Jérôme Boulanger
,
Anatole Chessel
,
Sabine Bardin
et al.
Journal articles
hal-01103126v1
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Détection a contrario multi-modale de structures curvilinéaire
Anatole Chessel
,
Ronan Fablet
,
Charles Kervrann
,
Frédéric Cao
RFIA'2008 : 15ème congrès francophone AFRIF-AFIA de reconnaissance des formes et intelligence artificielle , Jan 2008, Amiens, France. pp.1 - 8
Conference papers
hal-02344352v1
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Image Data Resource: a bioimage data integration and publication platform
Eleanor Williams
,
Josh Moore
,
Simon Li
,
Gabriella Rustici
,
Aleksandra Tarkowska
et al.
Journal articles
hal-01760728v1
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Change detection methods in fluorescence live cell imaging for sub-cellular trafficking analysis
Charles Kervrann
,
Jérôme Boulanger
,
Anatole Chessel
,
Bertrand Cinquin
,
Jean Salamero
et al.
BioImage Informatics II , Janelia Farm - Howard Hugues Medical Institute, Sep 2011, Ashburn VA, United States
Conference papers
hal-00651919v1
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The lncRNA 44s2 Study Applicability to the Design of 45-55 Exon Skipping Therapeutic Strategy for DMD
Elena Gargaun
,
Sestina Falcone
,
Guilhem Sole
,
Julien Durigneux
,
Andoni Urtizberea
et al.
Journal articles
hal-03163543v1
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Otolith image by computer vision : extractopn growth rings and recovering shape evolution of accretionary structures
Anatole Chessel
,
Ronan Fablet
,
Charles Kervrann
,
Frédéric Cao
Biosignals 2008 : International Conference on Bio-Inspired Signal Processing Systems31 , Jan 2008, Funchal, Portugal
Conference papers
hal-02344360v1
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GANs for Biological Image Synthesis
Anton Osokin
,
Anatole Chessel
,
Rafael E. Carazo Salas
,
Federico Vaggi
ICCV 2017 - IEEE International Conference on Computer Vision , Oct 2017, Venice, Italy
Conference papers
hal-01611692v1
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nAdder: A scale-space approach for the 3D analysis of neuronal traces
Minh Son Phan
,
Katherine Matho
,
Emmanuel Beaurepaire
,
Jean Livet
,
Anatole Chessel
et al.
2020
Preprints, Working Papers, ...
hal-03083517v1
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Computational geometry-based scale-space and modal image decomposition: Application to light video-microscopy imaging
Anatole Chessel
,
Bertrand Cinquin
,
Sabine Bardin
,
Jean Salamero
,
Charles Kervrann
et al.
Internationale Conference on Scale Space and Variational Methods , Jun 2009, Voss, Norway. pp.770-781
Conference papers
hal-00794884v1
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Evaluation of image sequences additive decomposition algorithms for membrane analysis in fluorescence video-microscopy
Anatole Chessel
,
Thierry Pecot
,
Sabine Bardin
,
Charles Kervrann
,
Jean Salamero
et al.
ISBI 2009 - IEEE International Symposium on Biomedical Imaging: From Nano to Macro , Jun 2009, Boston, United States. pp.1099-1102,
⟨10.1109/ISBI.2009.5193248⟩
Conference papers
hal-00794867v1
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Interpolating orientation fields : an axiomatic approach
Anatole Chessel
,
Ronan Fablet
,
Frédéric Cao
ECCV'06 : 9th European Conference on Computer Vision , May 2006, Graz, Austria. pp.241 - 254,
⟨10.1007/11744085_19⟩
Conference papers
hal-02344280v1
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A Genomic Multiprocess Survey of Machineries that Control and Link Cell Shape, Microtubule Organization, and Cell-Cycle Progression
Veronika Graml
,
Xenia Studera
,
Jonathan L.D. Lawson
,
Anatole Chessel
,
Marco Geymonat
et al.
Journal articles
hal-01101880v1
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EDAM-bioimaging : The ontology of bioimage informatics operations, topics, data, and formats
Matúš Kalaš
,
Laure Plantard
,
Nataša Sladoje
,
Joakim Lindblad
,
Moritz Alexander Kirschmann
et al.
Poster communications
hal-02267597v1
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