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Combinatorial Characterization of the Language Recognized by Factor and Suffix Oracles

Alban Mancheron , Christophe Moan
International Journal of Foundations of Computer Science, 2005, 16 (6), pp.1179-1191. ⟨10.1142/S0129054105003741⟩
Journal articles hal-00487228v1
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A Novel Approach for Comparative Genomics & Annotation Transfer

Alban Mancheron , Raluca Uricaru , Eric Rivals
2010
Other publications lirmm-00491326v2

Ehrlichia Ruminantium Genome Segmentations Reveal Novel Homologous Genes

Alban Mancheron , Raluca Uricaru , Eric Rivals
ISCB Africa ASBCB Joint Conference on Bioinformatics of Infectious Diseases, Nov 2009, Bamako, Mali
Conference papers lirmm-00491362v1
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Combining DGE and RNA-sequencing data to identify new polyA+ non-coding transcripts in the human genome

Nicolas Philippe , Elias Bou Samra , Anthony Boureux , Alban Mancheron , Florence Rufflé et al.
Nucleic Acids Research, 2014, 42 (5), pp.2820-2832. ⟨10.1093/nar/gkt1300⟩
Journal articles lirmm-01233107v1
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Voyage initiatique vers la bioinformatique

Alban Mancheron
GNU/Linux Magazine, 2021, 251, pp.44-56
Journal articles lirmm-03508541v1
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On-line & Incremental Update Properties of the Subsequence Automaton

Alban Mancheron , Jean-Émile Symphor
[Research Report] 2007, pp.13
Reports inria-00257567v1
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Reliable Bacterial Genome Comparison Tools

Eric Rivals , Alban Mancheron , Raluca Uricaru
ERCIM News, 2010, 82, pp.017-018
Journal articles lirmm-00511509v1
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An Alternative Approach to Multiple Genome Comparison

Alban Mancheron , Raluca Uricaru , Eric Rivals
Nucleic Acids Research, 2011, 39 (15), pp.e101. ⟨10.1093/nar/gkr177⟩
Journal articles lirmm-00620931v1
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Asymptotic Limits of a New Type of Maximization Recurrence with an Application to Bioinformatics

Kun-Mao Chao , An-Chiang Chu , Jesper Jansson , Richard S. Lemence , Alban Mancheron et al.
TAMC'12: 9th Annual Conference on Theory and Applications of Models of Computation, May 2012, Beijing, China. pp.622, ⟨10.1007/978-3-642-29952-0⟩
Conference papers lirmm-00717670v1
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Pattern discovery allowing gaps, substitution matrices and multiple score functions

Alban Mancheron , Irena Rusu
Workshop on Algorithms in BioInformatics (WABI), Sep 2003, Budapest, Hungary. pp.129-145
Conference papers hal-00487245v1
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FIASCO : un nouvel algorithme d'extraction d'itemsets fréquents dans les flots de données.

Lionel Vinceslas , Jean-Émile Symphor , Alban Mancheron , Pascal Poncelet
EGC: Extraction et Gestion des Connaissances, Jan 2008, Sophia-Antipoli, France. pp.235-236
Conference papers hal-00447421v1
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Conservez l’historique de vos commandes pour chaque projet, le retour

Alban Mancheron
GNU/Linux Magazine, 2020, 241, pp.24-39
Journal articles lirmm-02987788v1
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Une introduction à la programmation parallèle avec Open MPI et OpenMP

Alban Mancheron
GNU/Linux Magazine, 2018, Hors-Série, 99, pp.16-35
Journal articles lirmm-01981916v1
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Finding Frequent Subsequences in a Set of Texts

Alban Mancheron , Jean-Émile Symphor
[Research Report] 2007, pp.13
Reports inria-00257561v1
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Scripting Shell : configurer sa tablette Wacom en quelques heures

Alban Mancheron
GNU/Linux Magazine, 2022, Hors-Série, 117, pp.96-114
Journal articles lirmm-03655021v1
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Voyage initiatique vers la bioinformatique : la récompense est au bout du chemin

Alban Mancheron
GNU/Linux Magazine, 2022, 257, pp.44-59
Journal articles lirmm-03655025v1
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GECKO is a genetic algorithm to classify and explore high throughput sequencing data

Aubin Thomas , Sylvain Barriere , Lucile Broseus , Julie Brooke , Claudio Lorenzi et al.
Communications Biology, 2019, 2 (1), pp.1-8. ⟨10.1038/s42003-019-0456-9⟩
Journal articles lirmm-02163400v1
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C’est l’histoire d’un make…

Alban Mancheron
GNU/Linux Magazine, 2021, 247
Journal articles lirmm-03184547v2
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Extraction de Motifs Communs dans un Ensemble de Séquences. Application à l'identification de sites de liaison aux protéines dans les séquences primaires d'ADN.

Alban Mancheron
Autre [cs.OH]. Université de Nantes, 2006. Français. ⟨NNT : ⟩
Theses tel-00257587v1
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¡Viva la libertad!

Alban Mancheron
GNU/Linux Magazine, 2021, 254, pp.14-20
Journal articles lirmm-03508567v1
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RedOak: a reference-free and alignment-free structure for indexing a collection of similar genomes

Clement Agret , Annie Chateau , Gaetan Droc , Gautier Sarah , Alban Mancheron et al.
2021
Preprints, Working Papers, ... lirmm-03117453v1
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Combinatorial Characterization of the Language Recognized by Factor and Suffix Oracles

Alban Mancheron , Christophe Moan
Prague Stringology Conference, Aug 2004, Prague, Czech Republic. pp.139--154
Conference papers hal-00487234v1
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SPAMS : A Novel Incremental Approach for Sequential Pattern Mining in Data Streams

Lionel Venceslas , Jean-Émile Symphor , Alban Mancheron , Pascal Poncelet
Springer Verlag. Advances in Knowledge Discovery and Management, pp.201-216, 2009
Book sections lirmm-00435841v1
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Le FIA: un nouvel automate permettant l'extraction efficace d'itemsets fréquents dans les flots de données.

Jean-Émile Symphor , Alban Mancheron , Lionel Vinceslas , Pascal Poncelet
EGC: Extraction et Gestion des Connaissances, Jan 2008, Sophia-Antipolis, France. pp.157-168
Conference papers hal-00447420v1
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Novel Definition and Algorithm for Chaining Fragments with Proportional Overlaps

Raluca Uricaru , Alban Mancheron , Eric Rivals
RECOMB-CG: Comparative Genomics, Oct 2010, Ottawa, Canada. pp.161-172, ⟨10.1007/978-3-642-16181-0_14⟩
Conference papers lirmm-00527915v1
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iMOKA: k-mer based software to analyze large collections of sequencing data

Claudio Lorenzi , Sylvain Barriere , Jean-Philippe Villemin , Laureline Dejardin Bretones , Alban Mancheron et al.
Genome Biology, 2020, 21 (1), ⟨10.1186/s13059-020-02165-2⟩
Journal articles lirmm-02987774v1
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Entre algorithmique et programmation

Alban Mancheron
GNU/Linux Magazine, 2022, 255, pp.6-22
Journal articles lirmm-03508634v1
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Mieux comprendre les conditions d’utilisation de services

Alban Mancheron
GNU/Linux Magazine, 2022, Hors-Série, 117, pp.8-11
Journal articles lirmm-03655012v1
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Spams, une nouvelle approche incrémentale pour l'extraction de motifs séquentiels fréquents dans les Data streams

Lionel Vinceslas , Jean-Émile Symphor , Alban Mancheron , Pascal Poncelet
EGC: Extraction et Gestion des Connaissances, Jan 2009, Strasbourg, France. pp.205-216
Conference papers lirmm-00345563v1
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Voyage initiatique vers la bioinformatique

Alban Mancheron
GNU/Linux Magazine, 2021, 253, pp.20-38
Journal articles lirmm-03508556v1