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Sparse Reconstruction Challenge for diffusion MRI: Validation on a physical phantom to determine which acquisition scheme and analysis method to use?

Lipeng Ning , Frederik Laun , Yaniv Gur , Edward V.R. Dibella , Samuel Deslauriers-Gauthier , et al.
Medical Image Analysis, 2015, 26, pp.316-331. ⟨10.1016/j.media.2015.10.012⟩
Journal articles hal-01240197v1
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Estimation of Axonal Conduction Speed and the Inter Hemispheric Transfer Time using Connectivity Informed Maximum Entropy on the Mean

Samuel Deslauriers-Gauthier , Rachid Deriche
SPIE Medical Imaging 2019, Feb 2019, San Diego, United States
Conference papers hal-02063396v1
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Investigating the effect of DMRI signal representation on fully-connected neural networks brain tissue microstructure estimation

Mauro Zucchelli , Samuel Deslauriers-Gauthier , Rachid Deriche
ISBI 2021 - 18th IEEE International Symposium on Biomedical Imaging, Apr 2021, Nice / Virtual, France. ⟨10.1109/ISBI48211.2021.9434046⟩
Conference papers hal-03174220v1
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Reducing false positive connection in tractograms using joint structure-function filtering

Matteo Frigo , Guillermo Gallardo , Isa Costantini , Alessandro Daducci , Demian Wassermann , et al.
OHBM 2018 - Organization for Human Brain Mapping, Jun 2018, Singapore, Singapore. pp.1-3
Conference papers hal-01737434v1
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L1-Norm Regularized Deconvolution of Functional MRI BOLD Signal

Isa Costantini , Patryk Filipiak , Kostiantyn Maksymenko , Samuel Deslauriers-Gauthier , Rachid Deriche
C@UCA, Jun 2018, Fréjus, France
Poster communications hal-01855505v1
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Effects of tractography filtering on the topology and interpretability of connectomes

Matteo Frigo , Samuel Deslauriers-Gauthier , Drew Parker , Abdol Aziz Ould Ismail , Junghoon John Kim , et al.
OHBM 2019 - Organization for Human Brain Mapping, Jun 2019, Roma, Italy
Conference papers hal-02056641v1
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Deconvolution of fMRI Data using a Paradigm Free Iterative Approach based on Partial Differential Equations

Isa Costantini , Samuel Deslauriers-Gauthier , Rachid Deriche
OHBM 2019 - Organization for Human Brain Mapping Annual Meeting, Jun 2019, Rome, Italy
Conference papers hal-02071193v1
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Hyperbolic Model Captures Temporal Small Worldness of Brain Dynamics

Aurora Rossi , Pierluigi Crescenzi , Samuel Deslauriers-Gauthier , Emanuele Natale
NeuroMod meeting 2022, Jun 2022, Antibes, France.
Poster communications hal-03685173v1
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An Anisotropic 4D Filtering Approach to Recover Brain Activation From Paradigm-Free Functional MRI Data

Isa Costantini , Rachid Deriche , Samuel Deslauriers-Gauthier
Frontiers in Neuroimaging, 2022, 1, pp.815423. ⟨10.3389/fnimg.2022.815423⟩
Journal articles hal-03629113v1
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Temporal Brain Networks Dataset

Aurora Rossi , Emanuele Natale , Samuel Deslauriers-Gauthier
NeuroMod meeting 2023, Jun 2023, Antibes, France
Poster communications hal-04130380v1
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Network alignment and similarity reveal atlas-based topological differences in structural connectomes

Matteo Frigo , Emilio Cruciani , David Coudert , Rachid Deriche , Samuel Deslauriers-Gauthier , et al.
Network Neuroscience, 2021, ⟨10.1162/netn_a_00199⟩
Journal articles hal-03033777v2
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Tractography-based connectomes are dominated by false-positive connections

Klaus H Maier-Hein , Peter Neher , Jean-Christophe Houde , Marc-Alexandre Côté , Eleftherios Garyfallidis , et al.
2016
Preprints, Working Papers, ... hal-03007290v1
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TALON: Tractograms As Linear Operators in Neuroimaging

Matteo Frigo , Mauro Zucchelli , Rachid Deriche , Samuel Deslauriers-Gauthier
Software hal-03116143v1
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Diffusion MRI Tractography Filtering Techniques Change the Topology of Structural Connectomes

Matteo Frigo , Samuel Deslauriers-Gauthier , Drew Parker , Abdol Aziz Ould Ismail , Junghoon John Kim , et al.
Journal of Neural Engineering, In press, ⟨10.1088/1741-2552/abc29b⟩
Journal articles hal-02972198v1
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Connectivity-informed M/EEG inverse problem

Ivana Kojčić , Théodore Papadopoulo , Rachid Deriche , Samuel Deslauriers-Gauthier
GRAIL 2020 - MICCAI Workshop on GRaphs in biomedicAl Image anaLysis, Oct 2020, Lima, Peru
Conference papers hal-02986430v1
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Localization of Brain Microstructure Changes Associated with Alzheimer's Disease using Class Activation Maps

Aymene Mohammed Bouayed , Samuel Deslauriers-Gauthier , Rachid Deriche
Soph.I.A Summit 2022 : fifth edition of the international AI conference, Nov 2022, Sophia Antipolis, France. Proceedings of SophIA 2022
Poster communications hal-03879975v1

Predicting brain functional connectivity from structural connectivity using fully connected neural networks

Samuel Deslauriers-Gauthier , Mauro Zucchelli , Rachid Deriche
SophIA Summit, Nov 2020, Sophia-Antipolis, France
Conference papers hal-03363622v1
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Information Flow in the White Matter During a Motor Task: A Structural Connectivity Driven Approach

Guillermo Gallardo , Demian Wassermann , Rachid Deriche , Maxime Descoteaux , Samuel Deslauriers-Gauthier
OHBM 2017 Organization for Human Brain Mapping Annual Meeting, Jun 2017, Vancouver, Canada
Conference papers hal-01534978v1
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White matter fiber bundles as a source model in the MEG inverse problem

Kostiantyn Maksymenko , Théodore Papadopoulo , Samuel Deslauriers-Gauthier
COBCOM 2017 - Computational Brain Connectivity Mapping, Winter School Workshop, Nov 2017, Juan-les-Pins, France. 2017
Poster communications hal-01713075v1
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fMRI Deconvolution via Temporal Regularization using a LASSO model and the LARS algorithm

Isa Costantini , Patryk Filipiak , Kostiantyn Maksymenko , Samuel Deslauriers-Gauthier , Rachid Deriche
EMBC'18 - 40th International Engineering in Medicine and Biology Conference, Jul 2018, Honolulu, United States
Conference papers hal-01855467v1
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White Matter Information Flow Mapping from Diffusion MRI and EEG

Samuel Deslauriers-Gauthier , Jean-Marc Lina , Russell Butler , Kevin Whittingstall , Pierre-Michel Bernier , et al.
Journal articles hal-02187859v1
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Non-invasive inference of information flow using diffusion MRI, functional MRI, and MEG

Samuel Deslauriers-Gauthier , Isa Costantini , Rachid Deriche
Journal of Neural Engineering, 2020, 17 (4), pp.19. ⟨10.1088/1741-2552/ab95ec⟩
Journal articles hal-02925937v1
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Inference and Visualization of Information Flow in the Visual Pathway using dMRI and EEG

Samuel Deslauriers-Gauthier , Jean-Marc Lina , Russell Butler , Pierre-Michel Bernier , Kevin Whittingstall , et al.
MICCAI 2017 Medical Image Computing and Computer Assisted Intervention, Sep 2017, Québec, Canada
Conference papers hal-01556352v1
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Connectivity–informed spatio–temporal MEG source reconstruction: Simulation results using a MAR model

Ivana Kojčić , Théodore Papadopoulo , Rachid Deriche , Samuel Deslauriers-Gauthier
Colloque Line Garnero, Oct 2019, Paris, France
Poster communications hal-02379744v1
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Multi-compartment modelling of diffusion MRI signal shows TE-based volume fraction bias

Matteo Frigo , Mauro Zucchelli , Rutger H.J. Fick , Samuel Deslauriers-Gauthier , Rachid Deriche
OHBM 2020 - 26th meeting of the Organization of Human Brain Mapping, Jun 2020, Montreal, Canada
Conference papers hal-02925963v1
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Shallow convolutional neural network with rank-1 Fourier domain weights for brain signal classification

Sara Sedlar , Samuel Deslauriers-Gauthier , Rachid Deriche , Théodore Papadopoulo
Proceedings of SophIA 2022, Nov 2022, Sophia Antipolis, France
Poster communications hal-03878709v1
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Graph Alignment Exploiting the Spatial Organisation Improves the Similarity of Brain Networks

Anna Calissano , Théodore Papadopoulo , Xavier Pennec , Samuel Deslauriers-Gauthier
2022
Preprints, Working Papers, ... hal-03910761v1
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Incorporating transmission delays supported by diffusion MRI in MEG source reconstruction

Ivana Kojčić , Théodore Papadopoulo , Rachid Deriche , Samuel Deslauriers-Gauthier
ISBI 2021 - 18th IEEE International Symposium on Biomedical Imaging, Apr 2021, Nice, France. ⟨10.1109/ISBI48211.2021.9433861⟩
Conference papers hal-03143148v1
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Estimation of Axon Conduction Delay, Conduction Speed, and Diameter from Information Flow using Diffusion MRI and MEG

Samuel Deslauriers-Gauthier , Rachid Deriche
ISMRM 2019 - 27th Annual Meeting of International Society for Magnetic Resonance in Medicine, May 2019, Montreal, Canada
Conference papers hal-02074059v1
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Towards validation of diffusion MRI tractography: bridging the resolution gap with 3D Polarized Light Imaging

Abib Alimi , Samuel Deslauriers-Gauthier , Rachid Deriche
ISMRM 2019 - 27th Annual Meeting of International Society for Magnetic Resonance in Medicine, May 2019, Montréal, Canada
Conference papers hal-02070912v1