Search - Archive ouverte HAL Access content directly

Filter your results

63 Results

Human colon: a complex bioreactor. Conceptual modelling for the anaerobic digestion of the functional trophic chain

Rafael Munoz Tamayo , Jean-Philippe Steyer , Béatrice Laroche , Marion Leclerc
11. World Congress on Anaerobic Digestion, Sep 2007, Brisbane, Australia. 6 p
Conference papers hal-01204246v1
Image document

Four functional profiles for fibre and mucin metabolism in the human gut microbiome

Simon Labarthe , Sandra Plancade , Sébastien Raguideau , Florian Plaza Onate , Emmanuelle Le Chatelier et al.
Preprints, Working Papers, ... hal-03918193v1

Towards the human intestinal microbiota phylogenetic core

Julien J. Tap , Stanislas S. Mondot , Florence F. Levenez , Eric Pelletier , Christophe C. Caron et al.
Environmental Microbiology, 2009, 11 (10), pp.2574-2584. ⟨10.1111/j.1462-2920.2009.01982.x⟩
Journal articles istex hal-02667864v1

An integrated catalog of reference genes in the human gut microbiome

Junhua Li , Huijue Jia , Xianghang Cai , Huanzi Zhong , Qiang Feng et al.
Nature Biotechnology, 2014, 32, pp.834-841. ⟨10.1038/nbt.2942⟩
Journal articles hal-01195478v1
Image document

FiberGrowth Pipeline: A Framework Toward Predicting Fiber-Specific Growth From Human Gut Bacteroidetes Genomes

Bénédicte Colnet , Christian M K Sieber , Fanny Perraudeau , Marion Leclerc
Frontiers in Microbiology, 2021, 12, ⟨10.3389/fmicb.2021.632567⟩
Journal articles hal-03721314v1

A constrained NMF approach to analyze quantitative metagenomic data

Sébastien Raguideau , Béatrice Laroche , Marion Leclerc , Sandra Plancade
IFAC-PapersOnLine, 2016, 49 (26), pp.71-76. ⟨10.1016/j.ifacol.2016.12.105⟩
Journal articles hal-01455859v1

Mucosal healing progression after acute colitis in mice

Sandra Vidal-Lletjos , Mireille M. Andriamihaja , Anne Blais , Marta Grauso , Patricia Lepage et al.
World Journal of Gastroenterology, 2019, 25 (27), pp.3572-3589. ⟨10.3748/wjg.v25.i27.3572⟩
Journal articles hal-02371551v1

Modulation of the microbiota by oral antibiotics treats immunoglobulin A nephropathy in humanized mice

Jonathan Maurice M Chemouny , Patrick J Gleeson , Lilia Abbad , Gabriella Lauriero , Erwan Boedec et al.
Nephrology Dialysis Transplantation, 2019, 34 (7), pp.1135-1144. ⟨10.1093/ndt/gfy323⟩
Journal articles hal-02445631v1

H2/CO2 metabolism in acetogenic bacteria isolated from the human colon

Marion Leclerc , Annick Bernalier , Gérard Donadille , M. Lelait
Anaerobe, 1997, 3, pp.307-315
Journal articles hal-02688525v1
Image document

A metagenomic beta-glucuronidase uncovers a core adaptive function of the human intestinal microbiome

Karine K. Gloux , Olivier O. Berteau , Hanane H. El Oumami , Fabienne F. Beguet-Crespel , Marion M. Leclerc et al.
Proceedings of the National Academy of Sciences of the United States of America, 2011, 108, pp.4539 - 4546. ⟨10.1073/pnas.1000066107⟩
Journal articles hal-01001013v1
Image document

Bacteriophages: an underestimated role in human and animal health?

Marianne de Paepe , Marion Leclerc , Colin R. Tinsley , Marie Agnes Petit
Frontiers in Cellular and Infection Microbiology, 2014, 4, ⟨10.3389/fcimb.2014.00039⟩
Journal articles hal-01204359v1

Highlighting New Phylogenetic Specificities of Crohn's Disease Microbiota

Stanislas S. Mondot , S. S. Kang , J-Pierre J.-P. Furet , D. Aguirre D. A. de Carcer , C. C. Mcsweeney et al.
Inflammatory Bowel Diseases, 2011, 17 (1), pp.185 - 192. ⟨10.1002/ibd.21436⟩
Journal articles hal-01000994v1

Mathematical modelling of carbohydrate degradation by human colonic microbiota

Rafael Munoz Tamayo , Béatrice Laroche , Eric Walter , Joel Doré , Marion Leclerc et al.
Journal of Theoretical Biology, 2010, 266 (1), pp.189-20. ⟨10.1016/j.jtbi.2010.05.040⟩
Journal articles istex hal-00521148v1
Image document

A fibrolytic potential in the human ileum mucosal microbiota revealed by functional metagenomic

Orlane Patrascu , Fabienne Beguet-Crespel , Ludovica Marinelli , Emmanuelle Le Chatelier , Anne-Laure Abraham et al.
Scientific Reports, 2017, 7, ⟨10.1038/srep40248⟩
Journal articles hal-01606551v1
Image document

Bacteroides sp. strain D8, the first cholesterol-reducing bacterium isolated from human feces

Philippe Gerard , Pascale Lepercq , Marion Leclerc , Françoise Gavini , Pierre Raibaud et al.
Applied and Environmental Microbiology, 2007, 73 (18), pp.5742-5749. ⟨10.1128/AEM.02806-06⟩
Journal articles hal-01608615v1

Taxonomical and physiological characteristics of H2/Co2 utilizing acetogenic bacteria from the human colon

Marion Leclerc , Annick Bernalier , L. Elfoul , Gérard Donadille , A. Willems et al.
Symposium satellite, Sep 1995, Clermont-Ferrand, France
Conference papers hal-02775681v1

Characterization of the xylan-degrading microbial community from human faeces

Christophe Chassard , Valérie Goumy , Marion Leclerc , Christophe Del'Homme , Annick Bernalier-Donadille et al.
FEMS Microbiology Ecology, 2007, 61 (1), pp.121-131. ⟨10.1111/j.1574-6941.2007.00314.x⟩
Journal articles hal-02667820v1

Modelling and identification of in vitro homoacetogenesis by human-colon bacteria

Rafael Munoz Tamayo , Béatrice Laroche , Marion Leclerc , Eric Walter
16. Mediterranean Conference on Control and Automation, 2008, Ajaccio, France
Conference papers hal-01204248v1
Image document

Inferring Aggregated Functional Traits from Metagenomic Data Using Constrained Non-negative Matrix Factorization: Application to Fiber Degradation in the Human Gut Microbiota

Sébastien Raguideau , Sandra Plancade , Nicolas Pons , Marion Leclerc , Béatrice Laroche et al.
PLoS Computational Biology, 2016, 12 (12), pp.1:29. ⟨10.1371/journal.pcbi.1005252⟩
Journal articles hal-01454674v1
Image document

Structure of protein emulsion in food impacts intestinal microbiota, caecal luminal content composition and distal intestine characteristics in rats

Martin Beaumont , Daphné Jaoui , Veronique Douard , Damien Mat , Fanny Koeth et al.
Molecular Nutrition and Food Research, 2017, 61 (10), pp.1700078. ⟨10.1002/mnfr.201700078⟩
Journal articles hal-01598952v1

Human gut microbes impact host serum metabolome and insulin sensitivity

Helle Krogh Pedersen , Valborg Gudmundsdottir , Henrik Bjørn Nielsen , Tuulia Hyotylainen , Trine Nielsen et al.
Nature, 2016, 535 (12), ⟨10.1038/nature18646⟩
Journal articles hal-01594855v1

Respective roles of hematopoietic and nonhematopoietic nod2 on the gut microbiota and mucosal homeostasis

Ziad Alnabhani , Jean-Pierre Hugot , Nicolas Montcuquet , Karine K. Le Roux , Monique Dussaillant et al.
Inflammatory Bowel Diseases, 2016, 22 (4), pp.763-773. ⟨10.1097/MIB.0000000000000749⟩
Journal articles hal-02640188v1

Phylogenetic and Functional Specificities of Crohn’s Disease Microbiota

Stanislas Mondot , Julien Tap , Jean-Pierre Furet , Patricia Lepage , Joël Doré et al.
Conference on Gastrointestinal Function, Apr 2009, Chicago, United States. pp. 562-588, ⟨10.1007/s00248-009-9496-x⟩
Conference papers hal-03825735v1
Image document

Gut microbiota richness promotes its stability upon increased dietary fibre intake in healthy adults

Julien Tap , Jean-Pierre Furet , Martine Bensaada , Catherine Philippe , Hubert Roth et al.
Environmental Microbiology, 2015, 17 (12), pp.4954-4964. ⟨10.1111/1462-2920.13006⟩
Journal articles istex hal-01439024v1
Image document

Investigating Host Microbiota Relationships Through Functional Metagenomics

Elisabeth Laville , Josette Perrier , Nada Bejar , Marc Maresca , Jeremy Esque et al.
Frontiers in Microbiology, 2019, 10, 12 p. ⟨10.3389/fmicb.2019.01286⟩
Journal articles hal-02315852v1

Isolation and characterization of H2/CO2 utilizing acetogenic bacteria from human feces

Mélaine Decaudin , Annick Bernalier , Violaine Rochet , Marion Leclerc , A. Willems et al.
Nouvelles tendances en microbiologie anaerobie, Societe française de microbiologie, 1994
Book sections hal-02847984v1

H2/CO2-utilizing acetogenic bacteria from the human colon

Annick Bernalier , A. Willems , Marion Leclerc , M.D. Collins , Violaine Rochet et al.
95. General meeting ASM, May 1995, Washington, United States
Conference papers hal-02775784v1
Image document

Identification of Metabolic Signatures Linked to Anti-Inflammatory Effects of Faecalibacterium prausnitzii

Sylvie Miquel , Marion Leclerc , Rebeca Martin , Florian Chain , Marion Lenoir et al.
mBio, 2015, 6 (2), pp.e00300-15. ⟨10.1128/mBio.00300-15⟩
Journal articles hal-01226343v1
Image document

Lipo-Protein Emulsion Structure in the Diet Affects Protein Digestion Kinetics, Intestinal Mucosa Parameters and Microbiota Composition

Marion M. Oberli , Véronique Douard , Martin Beaumont , Daphné Jaoui , Fabienne Devime et al.
Molecular Nutrition and Food Research, 2018, 62 (2), pp.1700570. ⟨10.1002/mnfr.201700570⟩
Journal articles hal-01619023v1
Image document

Gut microbiota diversity and human diseases: should we reintroduce key predators in our ecosystem?

Alexis Mosca , Marion Leclerc , Jean P. Hugot
Frontiers in Microbiology, 2016, 7, ⟨10.3389/fmicb.2016.00455⟩
Journal articles hal-02638224v1