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Interactive 3D Fluid Simulation: Steering the Simulation in Progress Using Lattice Boltzmann Method

Mengchen Wang , Nicolas Ferey , Patrick Bourdot , Frédéric Magoulès
2019 18th International Symposium on Distributed Computing and Applications for Business Engineering and Science (DCABES), Nov 2019, Wuhan, China. pp.72-75, ⟨10.1109/DCABES48411.2019.00025⟩
Conference papers hal-02399846v1
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ExaViz: a Flexible Framework to Analyse, Steer and Interact with Molecular Dynamics Simulations

Matthieu Dreher , Jessica Prevoteau-Jonquet , Mikael Trellet , Marc Piuzzi , Marc Baaden , et al.
Faraday Discussions, 2014, Molecular simulations and visualization, 169, pp.119-142. ⟨10.1039/C3FD00142C⟩
Journal articles hal-00942627v1
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Dystrophin's central domain forms a complex filament that becomes disorganized by in-frame deletions

Olivier Delalande , Anne-Elisabeth Molza , Raphael dos Santos Morais , Angélique Chéron , Emeline Pollet , et al.
Journal of Biological Chemistry, 2018, 293 (18), pp.6637-6646. ⟨10.1074/jbc.M117.809798⟩
Journal articles hal-01795395v2
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REVIVOS: REalité VIrtuelle pour la construction de VOcabulaires Spécialisés

Nicolas Férey , Nioche Claire Toffano , Taillez Oriane Matte , Rachid Gherbi , W. Turner
18es Journées Francophones d'Ingénierie des Connaissances, Jul 2007, Grenoble, France. not specified
Conference papers hal-00509922v1
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Interactive simulation for easy decision-making in fluid dynamics

Mengchen Wang , Nicolas Férey , Frédéric Magoulès , Patrick Bourdot
Eurographics, May 2021, Vienna, Austria. ⟨10.2312/egs.20211022⟩
Conference papers hal-03328156v1
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Interface moléculaire tangible, modulaire, articulée, sans fil et sans marqueur, basée sur l’internet des objets

Nicolas Férey , Bastien Vincke , Mohamed Anis Ghaoui
33e conférence internationale francophone sur l’Interaction Humain-Machine (IHM'22), AFIHM, Apr 2022, Namur, Belgique
Conference papers hal-03835651v1

Advances in Human-Protein Interaction - Interactive and Immersive Molecular Simulations

Alex Tek , Benoist Laurent , Marc Piuzzi , Zhihan Lu , Matthieu Chavent , et al.
Weibo Cai and Hao Hong. Biochemistry, Genetics and Molecular Biology " "Protein-Protein Interactions - Computational and Experimental Tools", InTech, pp.27-65, 2012, 978-953-51-0397-4. ⟨10.5772/36568⟩
Book sections hal-00760181v1
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Characterizing the Influence of Motion Parameters on Performance when Acquiring Moving Targets

Alexandre Kouyoumdjian , Nicolas Ferey , Patrick Bourdot , Stéphane Huot
15th Human-Computer Interaction (INTERACT), Sep 2015, Bamberg, Germany. pp.148-155, ⟨10.1007/978-3-319-22723-8_12⟩
Conference papers hal-01207511v1
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ARPads: Mid-air Indirect Input for Augmented Reality

Eugenie Brasier , Olivier Chapuis , Nicolas Ferey , Jeanne Vezien , Caroline Appert
ISMAR 2020 - IEEE International Symposium on Mixed and Augmented Reality, Nov 2020, Porto de Galinhas, Brazil. 13 p
Conference papers hal-02915795v1
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BioSpring: an interactive and multi-resolution software for flexible docking and for mechanical exploration of large biomolecular assemblies

Nicolas Ferey , Olivier Delalande , Marc Baaden
JOBIM 2012 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2012, Rennes, France. pp.433-434
Conference papers hal-00761683v1
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A Multimodal VR Framework for Interactive Molecular Simulations

Alex Tek , Benoist Laurent , Nicolas Férey , Marc Baaden
EuroVR-EVE 2010, Nov 2010, Orsay, France
Poster communications hal-03977463v1
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Physical, Modular and Articulated Interface for Interactive Molecular Manipulation

Bastien Vincke , Mohamed Anis Ghaoui , Nicolas Ferey , Xavier Martinez
Sensors, 2020, 20 (18), pp.5415. ⟨10.3390/s20185415⟩
Journal articles hal-03030681v1
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Innovative interactive flexible docking method for multi-scale reconstruction elucidates dystrophin molecular assembly

Anne-Elisabeth Molza , Nicolas Férey , Mirjam Czjzek , Elisabeth Le Rumeur , Jean-François Hubert , et al.
Faraday Discussions, 2014, 169, pp.45-62. ⟨10.1039/C3FD00134B⟩
Journal articles hal-01018071v1
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Using Asynchronous Simulation Approach for Interactive Simulation

Mengchen Wang , Nicolas Ferey , Patrick Bourdot , Frédéric Magoulès
2019 18th International Symposium on Distributed Computing and Applications for Business Engineering and Science (DCABES), Nov 2019, Wuhan, China. pp.84-87, ⟨10.1109/DCABES48411.2019.00028⟩
Conference papers hal-02399881v1
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Visual Data Mining of Genomic Databases by Immersive Graph-Based Exploration

Nicolas Férey , Pierre-Emmanuel Gros , Joan Hérisson , Rachid Gherbi
GRAPHITE 2005, 3rd International Conference On Computer Graphics and Interactives Techniques In Autralia and Southeast Asia, 2005, Dunedin, New Zealand. pp.4
Conference papers hal-00145610v1
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Modeling the early stage of DNA sequence recognition within RecA nucleoprotein filaments.

Adrien Saladin , Christopher Amourda , Pierre Poulain , Nicolas Férey , Marc Baaden , et al.
Nucleic Acids Research, 2010, 38 (19), pp.6313-23. ⟨10.1093/nar/gkq459⟩
Journal articles hal-00533099v1

User Needs Analysis to Design a 3D Multimodal Protein-Docking Interface

Nicolas Ferey , Guillaume Bouyer , Christine Martin , Patrick Bourdot , Julien Nelson , et al.
IEEE Symposium on 3D User Interfaces 2008, Mar 2008, Reno, United States. ⟨10.1109/3DUI.2008.4476602⟩
Conference papers hal-01197539v1
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Semantics for an Integrative and Immersive Pipeline Combining Visualization and Analysis of Molecular Data

Mikael Trellet , Nicolas Ferey , Jakub Flotyński , Marc Baaden , Patrick Bourdot
Journal of Integrative Bioinformatics, 2018, 15 (2), pp.20180004. ⟨10.1515/jib-2018-0004⟩
Journal articles hal-01935586v1
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Navigation guidée par le contenu pour l'exploration moléculaire.

M. Trellet , N. Férey , M. Baaden , P. Bourdot
Journées de l’Association Française de Réalité Virtuelle (AFRV), 2013, Laval, France
Conference papers hal-01498083v1
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Ten simple rules to create a serious game, illustrated with examples from structural biology

Marc Baaden , Olivier Delalande , Nicolas Ferey , Samuela Pasquali , Jérôme Waldispühl , et al.
PLoS Computational Biology, 2018, 14 (3), pp.e1005955. ⟨10.1371/journal.pcbi.1005955⟩
Journal articles hal-01744190v1

Complex molecular assemblies at hand via interactive simulations.

Olivier Delalande , Nicolas Férey , Gilles Grasseau , Marc Baaden
Journal of Computational Chemistry, 2009, 30 (15), pp.2375-87. ⟨10.1002/jcc.21235⟩
Journal articles istex inserm-00713313v1
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Docking de protéines en réalité virtuelle. Une approche hybride et multimodale

Nicolas Férey , Guillaume Bouyer , Christine Martin , Abdelhamid Drif , Patrick Bourdot , et al.
Revue des Sciences et Technologies de l'Information - Série TSI : Technique et Science Informatiques, 2009, 28 (8), pp.983 - 1015. ⟨10.3166/tsi.28.983-1015⟩
Journal articles hal-01753902v1
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Multisensory VR interaction for protein-docking in the CoRSAIRe project

Nicolas Férey , Julien Nelson , Christine Martin , Lorenzo Picinali , Guillaume Bouyer , et al.
Virtual Reality, 2009, 13 (4), pp.273-293. ⟨10.1007/s10055-009-0136-z⟩
Journal articles hal-01753897v1
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Remote Collaboration across Heterogeneous Large Interactive Spaces

Cédric Fleury , Nicolas Ferey , Jean-Marc Vézien , Patrick Bourdot
IEEE VR International Workshop on 3D Collaborative Virtual Environments (3DCVE 2015), Mar 2015, Arles, France. ⟨10.1109/3DCVE.2015.7153591⟩
Conference papers hal-01242306v1
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Using Conceptual Graphs to embed expert knowledge in VR Interactions: Application to Structural Biology

Malik Qasim , Guillaume Bouyer , Nicolas Férey
5th Joint Virtual Reality Conference – JVRC 2013, Dec 2013, Campus Paris Saclay, France
Conference papers hal-01753890v1

Sensorimotor feedback for interactive realism: evaluation of a haptic driving paradigm for a forklift simulator

Pierre Martin , Nicolas Férey , Céline Clavel , Françoise Darses , Patrick Bourdot
International Conference EuroHaptics, Poika Isokoski; Jukka Springare, Jan 2012, Tampere, Finland
Conference papers hal-01845450v1
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Interactive Visual Analytics of Molecular Data in Immersive Environments via a Semantic Definition of the Content and the Context

Mickael Trellet , Nicolas Férey , Marc Baaden , Patrick Bourdot
IEEE VR 2016/VR 2016 Workshop on Immersive Analytics, Mar 2016, Greenville, SC, United States. pp.48-53, ⟨10.1109/IMMERSIVE.2016.7932383⟩
Conference papers hal-01497990v1
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Multi-resolution approach for interactively locating functionally linked ion binding sites by steering small molecules into electrostatic potential maps using a haptic device.

Olivier Delalande , Nicolas Ferey , Benoist Laurent , Marc Gueroult , Brigitte Hartmann , et al.
Pacific Symposium on Biocomputing, 2010, pp.205-15. ⟨10.1142/9789814295291_0023⟩
Journal articles hal-00661430v1

Interactive Molecular Dynamics: Scaling up to Large Systems

Matthieu Dreher , Marc Piuzzi , Ahmed Turki , Matthieu Chavent , Marc Baaden , et al.
Procedia Computer Science, 2013, 2013 International Conference on Computational Science, 18, pp.20-29. ⟨10.1016/j.procs.2013.05.165⟩
Journal articles hal-01084652v1

3D reconstruction with a markerless tracking method of flexible and modular molecular physical models: towards tangible interfaces

Xavier Martinez , Nicolas Férey , Jean-Marc Vézien , Patrick Bourdot
Journal of Virtual Reality and Broadcasting, 2017, pp.1-12
Journal articles hal-02351533v1