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Two-sample goodness-of-fit tests on the flat torus based on Wasserstein distance and their relevance to structural biology

Javier González-Delgado , Alberto González-Sanz , Juan Cortés , Pierre Neuvial
Electronic Journal of Statistics , 2023, 17 (1), pp.1547-1586. ⟨10.1214/23-EJS2135⟩
Journal articles hal-03369795v3
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A Sensitivity-Aware Motion Planner (SAMP) to Generate Intrinsically-Robust Trajectories

Simon Wasiela , Paolo Robuffo Giordano , Juan Cortés , Thierry Simeon
ICRA 2023 - IEEE International Conference on Robotics and Automation, May 2023, London, United Kingdom. pp.1-7
Conference papers hal-03808933v2
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Coordinated Multi-Robot Trajectory Tracking Control over Sampled Communication ⋆

Enrica Rossi , Marco Tognon , Luca Ballotta , Ruggero Carli , Juan Cortés , et al.
Automatica, 2023, 151, pp.110941. ⟨10.1016/j.automatica.2023.110941⟩
Journal articles hal-04010855v1
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Multi-site-specific isotopic labeling accelerates high-resolution structural investigations of pathogenic huntingtin exon-1

Carlos Elena-Real , Annika Urbanek , Xamuel Lund , Anna Morató , Amin Sagar , et al.
Structure, In press, ⟨10.1016/j.str.2023.04.003⟩
Journal articles hal-04085383v1
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Learned Sensitivity Metrics for Robust and Accurate Motion Planning

Simon Wasiela , Marco Cognetti , Paolo Robuffo Giordano , Juan Cortés , Thierry Simeon
Preprints, Working Papers, ... hal-04027078v1
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WASCO: A Wasserstein-based Statistical Tool to Compare Conformational Ensembles of Intrinsically Disordered Proteins

Javier González-Delgado , Amin Sagar , Christophe Zanon , Kresten Lindorff-Larsen , Pau Bernadó , et al.
Journal of Molecular Biology, 2023, pp.168053. ⟨10.1016/j.jmb.2023.168053⟩
Journal articles hal-04056662v1
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The structure of pathogenic huntingtin exon 1 defines the bases of its aggregation propensity

Carlos A Elena-Real , Amin Sagar , Annika Urbanek , Matija Popovic , Anna Morató , et al.
Nature Structural and Molecular Biology, 2023, 30 (3), pp.309 - 320. ⟨10.1038/s41594-023-00920-0⟩
Journal articles hal-04052774v1
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The sequence context in poly-alanine regions: structure, function and conservation

Pablo Mier , Carlos Elena-Real , Juan Cortés , Pau Bernadó , Miguel Andrade-Navarro
Bioinformatics, 2022, 38 (21), pp.4851-4858. ⟨10.1093/bioinformatics/btac610⟩
Journal articles hal-03778766v1
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Statistical proofs of the interdependence between nearest neighbor effects on polypeptide backbone conformations

Javier González-Delgado , Pau Bernadó , Pierre Neuvial , Juan Cortés
Journal of Structural Biology, 2022, 214 (4), pp.107907. ⟨10.1016/j.jsb.2022.107907⟩
Journal articles hal-03826233v1
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Dehydrogenation versus deprotonation of disaccharide molecules in vacuum: a thorough theoretical investigation

Bohdan Andriyevsky , Nathalie Tarrat , Juan Cortés , Johann Christian Schön
Royal Society Open Science, 2022, 9 (10), ⟨10.1098/rsos.220436⟩
Journal articles hal-03817247v1
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Low Complexity Induces Structure in Protein Regions Predicted as Intrinsically Disordered

Mariane Gonçalves-Kulik , Pablo Mier , Kristina Kastano , Juan Cortés , Pau Bernadó , et al.
Biomolecules, 2022, 12 (8), pp.1098. ⟨10.3390/biom12081098⟩
Journal articles hal-03767342v1
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Conformational buffering underlies functional selection in intrinsically disordered protein regions

Nicolás González-Foutel , Juliana Glavina , Wade Borcherds , Matías Safranchik , Susana Barrera-Vilarmau , et al.
Nature Structural and Molecular Biology, 2022, 29 (8), pp.781-790. ⟨10.1038/s41594-022-00811-w⟩
Journal articles hal-03767337v1
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Precise Cable-Suspended Pick-and-Place with an Aerial Multi-robot System

A E Jiménez-Cano , Dario Sanalitro , M. Tognon , A. Franchi , J. Cortés
Journal of Intelligent and Robotic Systems, 2022, 105 (3), pp.68. ⟨10.1007/s10846-022-01668-3⟩
Journal articles hal-03748086v1
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Indirect Force Control of a Cable-suspended Aerial Multi-Robot Manipulator

Dario Sanalitro , Marco Tognon , A Jimenez Cano , Juan Cortés , Antonio Franchi
IEEE Robotics and Automation Letters, 2022, 7 (3), pp.6726 - 6733. ⟨10.1109/LRA.2022.3176457⟩
Journal articles hal-03664826v1
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MoMA-LoopSampler: A web server to exhaustively sample protein loop conformations

Amélie Barozet , Kevin Molloy , Marc Vaisset , Christophe Zanon , Pierre Fauret , et al.
Bioinformatics, 2022, 38 (2), pp.552-553. ⟨10.1093/bioinformatics/btab584⟩
Journal articles hal-03326493v1
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A tripartite carbohydrate-binding module to functionalize cellulose nanocrystal

Angeline Pelus , Gaëlle Bordes , Sophie Barbe , Younes Bouchiba , Callum Burnard , et al.
Biomaterials Science, 2021, 9 (22), pp.7444-7455. ⟨10.1039/d1bm01156a⟩
Journal articles hal-03372120v1
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Current approaches to flexible loop modeling

Amélie Barozet , Pablo Chacón , Juan Cortés
Current Research in Structural Biology, 2021, 3, pp.187-191. ⟨10.1016/j.crstbi.2021.07.002⟩
Journal articles hal-03318652v1
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The diversity of molecular interactions involving intrinsically disordered proteins: A molecular modeling perspective

Ilinka Clerc , Amin Sagar , Alessandro Barducci , Nathalie Sibille , Pau Bernadó , et al.
Computational and Structural Biotechnology Journal, 2021, 19, pp.3817-3828. ⟨10.1016/j.csbj.2021.06.031⟩
Journal articles hal-03281983v1
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Molecular flexibility in computational protein design: an algorithmic perspective

Younes Bouchiba , Juan Cortés , Thomas Schiex , Sophie Barbe
Protein Engineering, Design and Selection, 2021, 34, pp.gzab011. ⟨10.1093/protein/gzab011⟩
Journal articles hal-03221838v1
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Interdomain linkers tailor the stability of immunoglobulin repeats in polyproteins

Tanuja Joshi , Surbhi Garg , Alejandro Estaña , Juan Cortés , Pau Bernadó , et al.
Biochemical and Biophysical Research Communications, 2021, 550, pp.43-48. ⟨10.1016/j.bbrc.2021.02.114⟩
Journal articles hal-03161535v1
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Protein loops with multiple meta-stable conformations: a challenge for sampling and scoring methods

Amélie Barozet , Marc Bianciotto , Marc Vaisset , Thierry Simeon , Hervé Minoux , et al.
Proteins - Structure, Function and Bioinformatics, 2021, 89 (2), pp.218-231. ⟨10.1002/prot.26008⟩
Journal articles hal-02947409v1
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Predicting secondary structure propensities in IDPs using simple statistics from three-residue fragments

Alejandro N Estaña , Amélie Barozet , Assia Mouhand , Marc Vaisset , Christophe Zanon , et al.
Journal of Molecular Biology, 2020, 342 (19), pp.5447-5459. ⟨10.1016/j.jmb.2020.07.026⟩
Journal articles hal-02920302v1
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Flanking regions determine the structure of the poly-glutamine homo- repeat in huntingtin through mechanisms common among glutamine-rich human proteins

Annika N Urbanek , Matija Popovic , Anna Morató , Alejandro N Estaña , Carlos A Elena-Real , et al.
Structure, 2020, 28 (7), pp.733-746.e5. ⟨10.1016/j.str.2020.04.008⟩
Journal articles hal-02893075v1
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Combining System Design and Path Planning

Laurent Denarie , Kevin Molloy , Marc Vaisset , Thierry Simeon , Juan Cortés
Goldberg K., Abbeel P., Bekris K., Miller L. Algorithmic Foundations of Robotics XII, 13, , pp.112-127, 2020, Springer Proceedings in Advanced Robotics, ⟨10.1007/978-3-030-43089-4_8⟩
Book sections hal-02571707v1
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Evidence of the reduced abundance of proline cis conformation in protein poly-proline tracts

Annika N Urbanek , Matija Popovic , Carlos A Elena-Real , Anna Morató , Alejandro N Estaña , et al.
Journal of the American Chemical Society, 2020, 142 (17), pp.7976-7986. ⟨10.1021/jacs.0c02263⟩
Journal articles hal-02545935v1
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Full-pose Manipulation Control of a Cable-suspended load with Multiple UAVs under Uncertainties

Dario Sanalitro , Heitor J Savino , Marco Tognon , Juan Cortés , Antonio Franchi
IEEE Robotics and Automation Letters, 2020, 5 (2), pp.2185 - 2191. ⟨10.1109/LRA.2020.2969930⟩
Journal articles hal-02460422v1
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Cooperative Aerial Load Transportation via Sampled Communication

Enrica Rossi , Marco Tognon , Ruggero Carli , Luca Schenato , Juan Cortés , et al.
IEEE Control Systems Letters, 2020, 4 (2), pp.277-282. ⟨10.1109/LCSYS.2019.2924413⟩
Journal articles hal-02170909v1
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A Reinforcement-Learning-Based Approach to Enhance Exhaustive Protein Loop Sampling

Amélie Barozet , Kevin Molloy , Marc Vaisset , Thierry Simeon , Juan Cortés
Bioinformatics, 2020, 36 (4), pp.1099-1106. ⟨10.1093/bioinformatics/btz684⟩
Journal articles hal-02289207v1
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Aide à la conception

Juan Cortés , Thomas Schiex
Le petit illustré, regards croisés de, 2020
Journal articles hal-03436420v1
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Polymorphism in carbohydrate self-assembly at surfaces: STM imaging and theoretical modelling of trehalose on Cu(100)

Sabine Abb , Nathalie Tarrat , Juan Cortés , Bohdan Andriyevsky , Ludger Harnau , et al.
RSC Advances, 2019, 9 (61), pp.35813-35819. ⟨10.1039/C9RA06764G⟩
Journal articles hal-02370437v1