Communication Dans Un Congrès Année : 2025

FAIRyMAGS – Optimising Metagenomics Assembled Genomes building: workflow finalisation, training material development, real data evaluation, and resource allocation tool creation

Paul Zierep
Giuseppe Defazio
  • Fonction : Auteur
Bruno Fosso
Martin Beracochea
Santiago Sanchez
  • Fonction : Auteur

Résumé

The FAIRyMAGs project aims to optimize metagenomics assembled genomes (MAGs) building by developing an end-to-end workflow through Galaxy, incorporating FAIR principles. The project addresses challenges in metagenomics research, including technically demanding workflows and high computational requirements, and will provide a reusable and accessible workflow for analyzing microbial communities. The project's objectives include finalizing the workflow, creating training materials, evaluating its performance on real data, and developing a tool for estimating resource allocation, with the goal of advancing scientific knowledge and supporting decision-making in biodiversity conservation, food security, and pathogen management.

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Dates et versions

hal-05132978 , version 1 (27-06-2025)

Identifiants

Citer

Paul Zierep, Bérénice Batut, Giuseppe Defazio, Bruno Fosso, Martin Beracochea, et al.. FAIRyMAGS – Optimising Metagenomics Assembled Genomes building: workflow finalisation, training material development, real data evaluation, and resource allocation tool creation. ELIXIR All Hands Meeting, 2025, Jun 2025, Thessaloniki, Greece. ⟨10.7490/f1000research.1120217.1⟩. ⟨hal-05132978⟩
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