Abstract. We evaluate the vertical turbulent-kinetic-energy (TKE) mixing scheme of the NEMO-SI3 ocean–sea-ice model in sea-ice-covered regions of the Arctic Ocean. Specifically, we assess the parameters involved in TKE mixed-layer-penetration (MLP) parameterization. This ad hoc parameterization aims to capture processes that impact the ocean surface boundary layer, such as near-inertial oscillations, ocean swells, and waves, which are often not well represented in the default TKE scheme. We evaluate this parameterization for the first time in three regions of the Arctic Ocean: the Makarov, Eurasian, and Canada basins. We demonstrate the strong effect of the scaling parameter that accounts for the presence of sea ice. Our results confirm that TKE MLP must be scaled down below sea ice to avoid unrealistically deep mixed layers. The other parameters evaluated are the percentage of energy penetrating below the mixed layer and the length scale of its decay with depth. All these parameters affect mixed-layer depth and its seasonal cycle, surface temperature, and salinity, as well as underlying stratification. Shallow mixed layers are associated with stronger stratification and fresh surface anomalies, and deeper mixed layers correspond to weaker stratification and salty surface anomalies. Notably, we observe significant impacts on sea-ice thickness across the Arctic Ocean in two scenarios: when the scaling parameter due to sea ice is absent and when the TKE mixed-layer-penetration process vanishes. In the former case, we observe an increase of several meters in mixed-layer depth, along with a reduction in sea-ice thickness ranging from 30 to 40 cm, reflecting the impact of stronger mixing. Conversely, in the latter case, we notice that a shallower mixed layer is accompanied by a moderate increase in sea-ice thickness, ranging from 10 to 20 cm, as expected from weaker mixing. Additionally, interannual variability suggests that experiments incorporating a scaling parameter based on sea-ice concentration display an increased mixed-layer depth during periods of reduced sea ice, which is consistent with observed trends. These findings underscore the influence of enhanced ocean mixing, through specific parameterizations, on the physical properties of the upper ocean and sea ice.