Effective marine management requires balancing conservation and sustainable use of resources. Food web models are useful for simulating direct and indirect effects of management scenarios on ecosystem functioning by using multiple indicators. However, a key challenge is consolidating these indicators into a single, comprehensive, measure, which is often required to guide management decisions, such as in Strategic Environmental Assessment. This study applies spatial multi-criteria analysis to food web model outputs to develop a single index for different marine management applications. We applied this framework to the case of the "Tegnùe di Chioggia", a Special Area of Conservation (SAC; IT3250047) under the Natura 2000 European network, located in the northern Adriatic Sea (Italy). This area, characterised by the presence of biogenic rocky outcrops, currently lacks a formal management plan. Using the Ecospace module of the Ecopath with Ecosim software, we simulated three management scenarios: 1) SAC expansion; 2) winter artisanal fishing in the SAC; 3) a combination of both. In line with ecosystem-based management, we focused on economically important trophic groups in the region, such as the Mediterranean mussel, Mytilus galloprovincialis, and striped venus clam, Chamelea gallina, which are present near the SAC. We also considered the efforts of the local fishing fleets. Ecosystem structure and functioning indicators, generated by the spatial food-web model, were linked to three criteria aligned with the management priorities of the area: nature conservation, aquaculture productivity, and fishing productivity. These criteria were aggregated into a final score to compare the management scenarios. The results showed that none of the scenarios would significantly alter community composition or ecosystem functioning compared to the current situation. However, they did show contrasting responses in the food web model. The SAC expansion scenario notably increased total biomass and commercial fish biomass, especially pectinids and cephalopods. The fishing scenario had a minimal impact on trophic groups. Ecosystem resilience and structure indicators were less sensitive to management scenarios than biomass indicators. However, the multi-criteria analysis revealed that the fishing scenario limited the benefits of expanding the SAC, due to reduced catches. The final score effectively ranked proposed scenarios, highlighting key indicators that influenced these variations. The proposed approach