TAGADA: Transcript And Gene Assembly, Deconvolution, Analysis - Archive ouverte HAL
Logiciel Année : 2024

TAGADA: Transcript And Gene Assembly, Deconvolution, Analysis

Cyril Kurylo
  • Fonction : Auteur
  • PersonId : 1214803
Sarah Djebali
Sylvain Foissac

Résumé

TAGADA is a Nextflow pipeline that processes RNA-Seq data. It parallelizes multiple tasks to control reads quality, align reads to a reference genome, assemble new transcripts to create a novel annotation, and quantify genes and transcripts.

Dates et versions

hal-04746401 , version 1 (21-10-2024)

Identifiants

Citer

Cyril Kurylo, Cervin Guyomar, Sarah Djebali, Sylvain Foissac. TAGADA: Transcript And Gene Assembly, Deconvolution, Analysis. 2024, ⟨swh:1:dir:53d48ed6773c2d1bcd11ed32b0ccb2bdda4fc87c⟩. ⟨hal-04746401⟩
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