<?xml version="1.0" encoding="utf-8"?>
<TEI xmlns="http://www.tei-c.org/ns/1.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:hal="http://hal.archives-ouvertes.fr/" xmlns:gml="http://www.opengis.net/gml/3.3/" xmlns:gmlce="http://www.opengis.net/gml/3.3/ce" version="1.1" xsi:schemaLocation="http://www.tei-c.org/ns/1.0 http://api.archives-ouvertes.fr/documents/aofr-sword.xsd">
  <teiHeader>
    <fileDesc>
      <titleStmt>
        <title>HAL TEI export of hal-04709981</title>
      </titleStmt>
      <publicationStmt>
        <distributor>CCSD</distributor>
        <availability status="restricted">
          <licence target="https://creativecommons.org/publicdomain/zero/1.0/">CC0 1.0 - Universal</licence>
        </availability>
        <date when="2026-05-22T14:52:06+02:00"/>
      </publicationStmt>
      <sourceDesc>
        <p part="N">HAL API Platform</p>
      </sourceDesc>
    </fileDesc>
  </teiHeader>
  <text>
    <body>
      <listBibl>
        <biblFull>
          <titleStmt>
            <title xml:lang="en">Co-circulation of two Alphaviruses in Burkina Faso: Chikungunya and O’nyong nyong viruses</title>
            <author role="co_first_author">
              <persName>
                <forename type="first">Bachirou</forename>
                <surname>Tinto</surname>
              </persName>
              <email type="md5">e3aa2d963da8f850d0b3c92f6606112b</email>
              <email type="domain">yahoo.fr</email>
              <idno type="idhal" notation="numeric">1146154</idno>
              <idno type="halauthorid" notation="string">1756055-1146154</idno>
              <idno type="ORCID">https://orcid.org/0000-0002-6101-8058</idno>
              <affiliation ref="#struct-1100798"/>
              <affiliation ref="#struct-557257"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Brice</forename>
                <surname>Bicaba</surname>
              </persName>
              <idno type="halauthorid">1756057-0</idno>
              <affiliation ref="#struct-1096883"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Thérèse</forename>
                <forename type="middle">Samdapawindé</forename>
                <surname>Kagoné</surname>
              </persName>
              <idno type="halauthorid">3241837-0</idno>
              <affiliation ref="#struct-557257"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">John</forename>
                <surname>Kayiwa</surname>
              </persName>
              <idno type="halauthorid">2580328-0</idno>
              <affiliation ref="#struct-564388"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Ingrid</forename>
                <surname>Rabe</surname>
              </persName>
              <idno type="halauthorid">3241838-0</idno>
              <affiliation ref="#struct-548010"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Corinne</forename>
                <forename type="middle">Simone Collette</forename>
                <surname>Merle</surname>
              </persName>
              <email type="md5">f7188b5602da84aab118b6a990bcc3f0</email>
              <email type="domain">who.int</email>
              <idno type="idhal" notation="numeric">1660248</idno>
              <idno type="halauthorid" notation="string">3241839-1660248</idno>
              <idno type="ORCID">https://orcid.org/0000-0003-4229-365X</idno>
              <idno type="IDREF">https://www.idref.fr/067309402</idno>
              <affiliation ref="#struct-548010"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Alidou</forename>
                <surname>Zango</surname>
              </persName>
              <idno type="halauthorid">3241840-0</idno>
              <affiliation ref="#struct-557257"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Ahidjo</forename>
                <surname>Ayouba</surname>
              </persName>
              <idno type="halauthorid">158983-0</idno>
              <affiliation ref="#struct-1100813"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Sara</forename>
                <surname>Salinas</surname>
              </persName>
              <idno type="halauthorid">646397-0</idno>
              <affiliation ref="#struct-1100798"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Dramane</forename>
                <surname>Kania</surname>
              </persName>
              <idno type="halauthorid">879935-0</idno>
              <affiliation ref="#struct-557257"/>
            </author>
            <author role="co_last_author">
              <persName>
                <forename type="first">Yannick</forename>
                <surname>Simonin</surname>
              </persName>
              <idno type="halauthorid">2539776-0</idno>
              <affiliation ref="#struct-1100798"/>
            </author>
            <editor role="depositor">
              <persName>
                <forename>Valérie</forename>
                <surname>DIAMANT-BERGER</surname>
              </persName>
              <email type="md5">a61334a5954cdc140a41bed3a6a12ac9</email>
              <email type="domain">inserm.fr</email>
            </editor>
          </titleStmt>
          <editionStmt>
            <edition n="v1" type="current">
              <date type="whenSubmitted">2024-09-26 09:20:36</date>
              <date type="whenModified">2026-04-02 15:38:02</date>
              <date type="whenReleased">2024-09-30 17:09:07</date>
              <date type="whenProduced">2024-06-13</date>
              <date type="whenEndEmbargoed">2024-09-26</date>
              <ref type="file" target="https://hal.science/hal-04709981v1/document">
                <date notBefore="2024-09-26"/>
              </ref>
              <ref type="file" subtype="author" n="1" target="https://hal.science/hal-04709981v1/file/journal.pntd.0011712.pdf" id="file-4709981-4097098">
                <date notBefore="2024-09-26"/>
              </ref>
              <ref type="externalLink" target="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11206941"/>
            </edition>
            <respStmt>
              <resp>contributor</resp>
              <name key="1298670">
                <persName>
                  <forename>Valérie</forename>
                  <surname>DIAMANT-BERGER</surname>
                </persName>
                <email type="md5">a61334a5954cdc140a41bed3a6a12ac9</email>
                <email type="domain">inserm.fr</email>
              </name>
            </respStmt>
          </editionStmt>
          <publicationStmt>
            <distributor>CCSD</distributor>
            <idno type="halId">hal-04709981</idno>
            <idno type="halUri">https://hal.science/hal-04709981</idno>
            <idno type="halBibtex">tinto:hal-04709981</idno>
            <idno type="halRefHtml">&lt;i&gt;PLoS Neglected Tropical Diseases&lt;/i&gt;, 2024, 18 (6), pp.e0011712. &lt;a target="_blank" href="https://dx.doi.org/10.1371/journal.pntd.0011712"&gt;&amp;#x27E8;10.1371/journal.pntd.0011712&amp;#x27E9;&lt;/a&gt;</idno>
            <idno type="halRef">PLoS Neglected Tropical Diseases, 2024, 18 (6), pp.e0011712. &amp;#x27E8;10.1371/journal.pntd.0011712&amp;#x27E9;</idno>
            <availability status="restricted">
              <licence target="https://about.hal.science/hal-authorisation-v1/">HAL Authorization<ref corresp="#file-4709981-4097098"/></licence>
            </availability>
          </publicationStmt>
          <seriesStmt>
            <idno type="stamp" n="INSERM">INSERM - Institut national de la santé et de la recherche médicale</idno>
            <idno type="stamp" n="IRD">IRD - Institut de recherche pour le développement</idno>
            <idno type="stamp" n="UNIV-AG">Université des Antilles</idno>
            <idno type="stamp" n="UNIV-MONTPELLIER">Université de Montpellier</idno>
            <idno type="stamp" n="PCCI">PCCEI - Pathogenesis and Control of Chronic and Emerging Infections</idno>
            <idno type="stamp" n="UM-2015-2021" corresp="UNIV-MONTPELLIER">Université de Montpellier (2015-2021)</idno>
            <idno type="stamp" n="UM-EPE" corresp="UNIV-MONTPELLIER">Université de Montpellier - EPE</idno>
          </seriesStmt>
          <notesStmt>
            <note type="audience" n="2">International</note>
            <note type="popular" n="0">No</note>
            <note type="peer" n="1">Yes</note>
          </notesStmt>
          <sourceDesc>
            <biblStruct>
              <analytic>
                <title xml:lang="en">Co-circulation of two Alphaviruses in Burkina Faso: Chikungunya and O’nyong nyong viruses</title>
                <author role="co_first_author">
                  <persName>
                    <forename type="first">Bachirou</forename>
                    <surname>Tinto</surname>
                  </persName>
                  <email type="md5">e3aa2d963da8f850d0b3c92f6606112b</email>
                  <email type="domain">yahoo.fr</email>
                  <idno type="idhal" notation="numeric">1146154</idno>
                  <idno type="halauthorid" notation="string">1756055-1146154</idno>
                  <idno type="ORCID">https://orcid.org/0000-0002-6101-8058</idno>
                  <affiliation ref="#struct-1100798"/>
                  <affiliation ref="#struct-557257"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Brice</forename>
                    <surname>Bicaba</surname>
                  </persName>
                  <idno type="halauthorid">1756057-0</idno>
                  <affiliation ref="#struct-1096883"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Thérèse</forename>
                    <forename type="middle">Samdapawindé</forename>
                    <surname>Kagoné</surname>
                  </persName>
                  <idno type="halauthorid">3241837-0</idno>
                  <affiliation ref="#struct-557257"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">John</forename>
                    <surname>Kayiwa</surname>
                  </persName>
                  <idno type="halauthorid">2580328-0</idno>
                  <affiliation ref="#struct-564388"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Ingrid</forename>
                    <surname>Rabe</surname>
                  </persName>
                  <idno type="halauthorid">3241838-0</idno>
                  <affiliation ref="#struct-548010"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Corinne</forename>
                    <forename type="middle">Simone Collette</forename>
                    <surname>Merle</surname>
                  </persName>
                  <email type="md5">f7188b5602da84aab118b6a990bcc3f0</email>
                  <email type="domain">who.int</email>
                  <idno type="idhal" notation="numeric">1660248</idno>
                  <idno type="halauthorid" notation="string">3241839-1660248</idno>
                  <idno type="ORCID">https://orcid.org/0000-0003-4229-365X</idno>
                  <idno type="IDREF">https://www.idref.fr/067309402</idno>
                  <affiliation ref="#struct-548010"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Alidou</forename>
                    <surname>Zango</surname>
                  </persName>
                  <idno type="halauthorid">3241840-0</idno>
                  <affiliation ref="#struct-557257"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Ahidjo</forename>
                    <surname>Ayouba</surname>
                  </persName>
                  <idno type="halauthorid">158983-0</idno>
                  <affiliation ref="#struct-1100813"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Sara</forename>
                    <surname>Salinas</surname>
                  </persName>
                  <idno type="halauthorid">646397-0</idno>
                  <affiliation ref="#struct-1100798"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Dramane</forename>
                    <surname>Kania</surname>
                  </persName>
                  <idno type="halauthorid">879935-0</idno>
                  <affiliation ref="#struct-557257"/>
                </author>
                <author role="co_last_author">
                  <persName>
                    <forename type="first">Yannick</forename>
                    <surname>Simonin</surname>
                  </persName>
                  <idno type="halauthorid">2539776-0</idno>
                  <affiliation ref="#struct-1100798"/>
                </author>
              </analytic>
              <monogr>
                <idno type="halJournalId" status="VALID">57984</idno>
                <idno type="issn">1935-2727</idno>
                <idno type="eissn">1935-2735</idno>
                <title level="j">PLoS Neglected Tropical Diseases</title>
                <imprint>
                  <publisher>Public Library of Science</publisher>
                  <biblScope unit="volume">18</biblScope>
                  <biblScope unit="issue">6</biblScope>
                  <biblScope unit="pp">e0011712</biblScope>
                  <date type="datePub">2024-06-13</date>
                </imprint>
              </monogr>
              <idno type="doi">10.1371/journal.pntd.0011712</idno>
              <idno type="pubmed">38870214</idno>
              <idno type="pubmedcentral">PMC11206941</idno>
            </biblStruct>
          </sourceDesc>
          <profileDesc>
            <langUsage>
              <language ident="en">English</language>
            </langUsage>
            <textClass>
              <classCode scheme="halDomain" n="sdv">Life Sciences [q-bio]</classCode>
              <classCode scheme="halDomain" n="sdv.imm">Life Sciences [q-bio]/Immunology</classCode>
              <classCode scheme="halDomain" n="sdv.mhep">Life Sciences [q-bio]/Human health and pathology</classCode>
              <classCode scheme="halDomain" n="sdv.mhep.mi">Life Sciences [q-bio]/Human health and pathology/Infectious diseases</classCode>
              <classCode scheme="halTypology" n="ART">Journal articles</classCode>
              <classCode scheme="halOldTypology" n="ART">Journal articles</classCode>
              <classCode scheme="halTreeTypology" n="ART">Journal articles</classCode>
            </textClass>
            <abstract xml:lang="en">
              <p>Background: Chikungunya virus (CHIKV) and O'nyong nyong virus (ONNV) are phylogenetically related alphaviruses in the Semliki Forest Virus (SFV) antigenic complex of the Togaviridae family. There are limited data on the circulation of these two viruses in Burkina Faso. The aim of our study was to assess their circulation in the country by determining seroprevalence to each of the viruses in blood donor samples and by retrospective molecular and serological testing of samples collected as part of national measles and rubella surveillance.Methodology/principal findings: All blood donor samples were analyzed on the Luminex platform using CHIKV and ONNV E2 antigens. Patient samples collected during national measles-rubella surveillance were screened by an initial ELISA for CHIKV IgM (CHIKjj Detect IgM ELISA) at the national laboratory. The positive samples were then analyzed by a second ELISA test for CHIKV IgM (CDC MAC-ELISA) at the reference laboratory. Finally, samples that had IgM positive results for both ELISA tests and had sufficient residual volume were tested by plaque reduction neutralization testing (PRNT) for CHIKV and ONNV. These same patient samples were also analyzed by rRT-PCR for CHIKV. Among the blood donor specimens, 55.49% of the samples were positive for alphaviruses including both CHIKV and ONNV positive samples. Among patient samples collected as part of national measles and rubella surveillance, 3.09% were IgM positive for CHIKV, including 2.5% confirmed by PRNT. PRNT failed to demonstrate any ONNV infections in these samples. No samples tested by RT-qPCR. had detectable CHIKV RNA.Conclusions/significance: Our results suggest that CHIKV and ONNV have been circulating in the population of Burkina Faso and may have been confused with malaria, dengue fever or other febrile diseases such as measles or rubella. Our study underscores the necessity to enhance arbovirus surveillance systems in Burkina Faso.</p>
            </abstract>
          </profileDesc>
        </biblFull>
      </listBibl>
    </body>
    <back>
      <listOrg type="structures">
        <org type="laboratory" xml:id="struct-1100798" status="VALID">
          <idno type="RNSR">201119394M</idno>
          <idno type="ROR">https://ror.org/01yw9jt43</idno>
          <orgName>Pathogenesis and Control of Chronic and Emerging Infections</orgName>
          <orgName type="acronym">PCCEI</orgName>
          <date type="start">2022-01-01</date>
          <desc>
            <address>
              <addrLine>INSERM60 Rue de NavacellesCS 3449334394 Montpellier cedex 5 France</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">https://www.pccei.fr/</ref>
          </desc>
          <listRelation>
            <relation name="U 1058" active="#struct-303623" type="direct"/>
            <relation active="#struct-524399" type="direct"/>
            <relation active="#struct-572076" type="direct"/>
            <relation active="#struct-199980" type="indirect"/>
            <relation active="#struct-1100589" type="direct"/>
          </listRelation>
        </org>
        <org type="institution" xml:id="struct-557257" status="VALID">
          <idno type="ROR">https://ror.org/04nhm0g90</idno>
          <orgName>Centre Muraz [Bobo-Dioulasso, Burkina Faso]</orgName>
          <date type="start">1939-01-01</date>
          <desc>
            <address>
              <addrLine>2054, Avenue Mamadou KONATE, Lot 218, 01 BP 390 Bobo-Dioulasso, Burkina Faso</addrLine>
              <country key="BF"/>
            </address>
            <ref type="url">https://www.centre-muraz.bf/</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-1096883" status="INCOMING">
          <orgName>Centre des opérations de réponse aux urgences sanitaires (CORUS)</orgName>
          <desc>
            <address>
              <addrLine>Ouagadougou</addrLine>
              <country key="BF"/>
            </address>
          </desc>
        </org>
        <org type="institution" xml:id="struct-564388" status="VALID">
          <idno type="ROR">https://ror.org/04509n826</idno>
          <orgName>Uganda Virus Research Institute</orgName>
          <orgName type="acronym">UVRI</orgName>
          <desc>
            <address>
              <addrLine>Plot No: 51 -59 Nakiwogo RoadP.O.Box 49 Entebbe Uganda</addrLine>
              <country key="UG"/>
            </address>
            <ref type="url">https://www.uvri.go.ug/</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-548010" status="VALID">
          <orgName>Organisation Mondiale de la Santé / World Health Organization Office [Genève, Suisse]</orgName>
          <orgName type="acronym">OMS / WHO</orgName>
          <desc>
            <address>
              <addrLine>Av. Appia 20, 1211 Genève, Suisse</addrLine>
              <country key="CH"/>
            </address>
            <ref type="url">https://www.who.int/</ref>
          </desc>
        </org>
        <org type="laboratory" xml:id="struct-1100813" status="VALID">
          <idno type="ISNI">0000000403858088</idno>
          <idno type="RNSR">201119485L</idno>
          <idno type="ROR">https://ror.org/014sj8802</idno>
          <orgName>Recherches Translationnelles sur le VIH et les maladies infectieuses endémiques et émergentes</orgName>
          <orgName type="acronym">TransVIHMI</orgName>
          <date type="start">2022-01-01</date>
          <desc>
            <address>
              <addrLine>Centre IRD France Sud 911, avenue Agropolis BP 64501 F-34394 Montpellier cedex 5</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.umi233.com/</ref>
          </desc>
          <listRelation>
            <relation name="UMI 233" active="#struct-67872" type="direct"/>
            <relation name="U 1175" active="#struct-303623" type="direct"/>
            <relation active="#struct-1100589" type="direct"/>
          </listRelation>
        </org>
        <org type="institution" xml:id="struct-303623" status="VALID">
          <idno type="IdRef">026388278</idno>
          <idno type="ROR">https://ror.org/02vjkv261</idno>
          <orgName>Institut National de la Santé et de la Recherche Médicale</orgName>
          <orgName type="acronym">INSERM</orgName>
          <desc>
            <address>
              <addrLine>101, rue de Tolbiac, 75013 Paris</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.inserm.fr</ref>
          </desc>
        </org>
        <org type="regroupinstitution" xml:id="struct-524399" status="VALID">
          <idno type="IdRef">187841578</idno>
          <idno type="ROR">https://ror.org/02ryfmr77</idno>
          <orgName>Université des Antilles</orgName>
          <orgName type="acronym">UA</orgName>
          <date type="start">2015-01-01</date>
          <desc>
            <address>
              <addrLine>Université des Antilles | Fouillole - BP 250 - 97157 Pointe-à-Pitre</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.univ-antilles.fr/</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-572076" status="VALID">
          <orgName>Établissement Français du Sang [Montpellier]</orgName>
          <orgName type="acronym">EFS - Montpellier</orgName>
          <desc>
            <address>
              <addrLine>Site EFS Pierre Cazal_ Parc Euromédecine 392 avenue du Professeur Jean-Louis Viala 34184 Montpellier</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">https://dondesang.efs.sante.fr/occitanie-pyrenees-mediterranee/maison-du-don-de-montpellier</ref>
          </desc>
          <listRelation>
            <relation active="#struct-199980" type="direct"/>
          </listRelation>
        </org>
        <org type="regroupinstitution" xml:id="struct-199980" status="VALID">
          <orgName>Établissement Français du Sang [La Plaine Saint-Denis]</orgName>
          <orgName type="acronym">EFS</orgName>
          <date type="start">2000-01-01</date>
          <desc>
            <address>
              <addrLine>20 Avenue du Stade de France 93218 La Plaine Saint Denis</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">https://www.dondusang.net</ref>
          </desc>
        </org>
        <org type="regroupinstitution" xml:id="struct-1100589" status="VALID">
          <idno type="ROR">https://ror.org/051escj72</idno>
          <orgName>Université de Montpellier</orgName>
          <orgName type="acronym">UM</orgName>
          <date type="start">2022-01-01</date>
          <desc>
            <address>
              <addrLine>163 rue Auguste Broussonnet - 34090 Montpellier</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.umontpellier.fr/</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-67872" status="VALID">
          <idno type="IdRef">050165224</idno>
          <idno type="ROR">https://ror.org/05q3vnk25</idno>
          <orgName>Institut de Recherche pour le Développement</orgName>
          <orgName type="acronym">IRD</orgName>
          <desc>
            <address>
              <addrLine>SiègeLe Sextant 44, bd de DunkerqueCS 9000913572 Marseille cedex 02</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.ird.fr/</ref>
          </desc>
        </org>
      </listOrg>
    </back>
  </text>
</TEI>