Joint Multi-Contrast Reconstruction of Fetal MRI based on Implicit Neural Representations
Reconstruction jointe Multi-contraste d'IRM de cerveaux de foetus par Représentation Neuronale Implicite
Résumé
Fetal cerebral brain magnetic resonance imaging (MRI) is
critical for the detection of abnormal brain development before birth. A
key image processing step is the reconstruction of a 3D high resolution
volume from the acquired series of 2D slices. Several types of MR se-
quences are commonly acquired during a scanning session, but current
reconstruction methods consider each sequence (or contrast) separately.
Multi-contrast techniques have been proposed but they do not compen-
sate for potential movement during the acquisition, which occurs almost
systematically in the context of fetal MRI. In this work, we introduce
a new method for the joint reconstruction of multiple 3D volumes from
different contrasts. Our method combines the redundant and complemen-
tary information across several stacks of 2D slices from different acquisi-
tion sequences via an implicit neural representation, and includes a slice
motion correction module. Our results on both simulations and real data
acquired in clinical routine demonstrates the relevance and efficiency of
the proposed method.
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