ABSTRACT Fine sediment stored in the gravel bed is an important component of river systems. Current field protocols usually allow evaluation of the silt–clay fraction of fine sediment stocks only and neglect the sand fraction. This study proposes a new protocol to quantify fine sediment stocks, including the sand fraction inside the gravel bed matrix. Fine sediment stocks were sampled within patches of 0.30 m × 0.30 m on the dry gravel bed surface, separating the surface layer and the subsurface layer. The grain‐size distribution of the samples was obtained by field sieving (10 mm, 2 mm, 500 μm and 100 μm) over a bucket, using a known volume of water. The mass of the fraction below 100 μm was measured based on the concentration within the bucket. The local stocks were then integrated over the whole river reach by assigning local stocks to facies, in which fine sediment stocks were assumed to be homogeneously distributed. The methodology was applied to a 1 km long reach of the River Galabre (Southern French Alps), characterized by significant fine sediment stocks and upstream sediment input. Results from local measurements show a large amount of sand in both surface and subsurface layers. The quantity of sand can reach up to three times the quantity of silt–clay. An estimation of porosity showed that fine material may play an important role in structuring the bed, since porosity increases with increasing fine sediment content. The potential fine sediment stock that can be resuspended due to channel migration is found to be of the same order of magnitude as the sediment budget estimated from the measured flux in the upstream hydrometric station of the studied reach.