Global fine-resolution data on springtail abundance and community structure - Archive ouverte HAL
Article Dans Une Revue (Data Paper) Scientific Data Année : 2024

Global fine-resolution data on springtail abundance and community structure

Anton M Potapov (1, 2, 3) , Ting-Wen Chen (1) , Anastasia V Striuchkova (4) , Juha M Alatalo (5) , Douglas Alexandre (6) , Javier Arbea (7) , Thomas Ashton (8) , Frank Ashwood (8) , Anatoly B Babenko (9) , Ipsa Bandyopadhyaya (10) , Carolina Riviera Duarte Maluche Baretta (11) , Dilmar Baretta (11) , Andrew D Barnes (12) , Bruno C Bellini (13) , Mohamed Bendjaballah (14) , Matty P Berg (15, 16) , Verónica Bernava (17) , Stef Bokhorst (18) , Anna I Bokova (4) , Thomas Bolger (19) , Mathieu Bouchard (20) , Roniere A Brito (21) , Damayanti Buchori (22, 23) , Gabriela Castaño-Meneses (24) , Matthieu Chauvat (25) , Mathilde Chomel (26) , Yasuko Chow (27) , Steven L Chown (28) , Aimee T Classen (29) , Jérôme Cortet (30) , Peter Čuchta (31) , Ana Manuela de la Pedrosa (32) , Estevam C A de Lima (33) , Louis E Deharveng (34) , Enrique Doblas Miranda (35) , Jochen Drescher (1) , Nico Eisenhauer (2, 3) , Jacintha Ellers (18) , Olga Ferlian (2, 3) , Susana S D Ferreira (18) , Aila S Ferreira (36) , Cristina Fiera (37) , Juliane Filser (38) , Oscar Franken (39, 40) , Saori Fujii (41) , Essivi Gagnon Koudji (42, 43) , Meixiang Gao (44) , Benoit Gendreau-Berthiaume (42, 43, 45) , Charles Gers (46) , Michelle Greve (47) , Salah Hamra-Kroua (14) , I. Tanya Handa (42, 43) , Motohiro Hasegawa (48) , Charlène Heiniger (49) , Takuo Hishi (50) , Martin Holmstrup (51) , Pablo Homet (52) , Toke T Høye (51) , Mari Ivask (53, 54) , Bob Jacques (55) , Charlene Janion-Scheepers (56, 57) , Malte Jochum (2, 3, 58) , Sophie Joimel (59) , Bruna Claudia S. Jorge (60) , Edite Juceviča (61) , Esther M Kapinga (62) , Ľubomír Kováč (63) , Eveline J Krab (64) , Paul Henning Krogh (51) , Annely Kuu (54) , Natalya Kuznetsova (4) , Weng Ngai Lam (27) , Dunmei Lin (65) , Zoë Lindo (66) , Amy W P Liu (67) , Jing-Zhong Lu (1) , María José Luciáñez (68) , Michael T Marx (69) , Amanda Mawan (1) , Matthew A McCary (70) , Maria A Minor (71) , Grace I Mitchell (72) , David Moreno (73, 74) , Taizo Nakamori (75) , Ilaria Negri (76) , Uffe N Nielsen (77) , Raúl Ochoa-Hueso (78) , Luís Carlos I. Oliveira Filho (79) , José G Palacios-Vargas (80) , Melanie M Pollierer (1) , Jean-François Ponge (81) , Mikhail B Potapov (4) , Pascal Querner (82) , Bibishan Rai (72) , Natália Raschmanová (63) , Muhammad Imtiaz Rashid (83) , Laura J Raymond-Léonard (42, 43) , Aline S Reis (84) , Giles M Ross (77) , Laurent Rousseau (42, 43) , David J Russell (85) , Ruslan A Saifutdinov (9) , Sandrine Salmon (81) , Mathieu Santonja (86) , Anna K Saraeva (87) , Emma J Sayer (88, 89) , Nicole Scheunemann (85) , Cornelia Scholz (90) , Julia Seeber (91, 92) , Peter Shaw (93) , Yulia B Shveenkova (94) , Eleanor M Slade (27) , Sophya Stebaeva (95) , Maria Sterzynska (96) , Xin Sun (97) , Winda Ika Susanti (1) , Anastasia A Taskaeva (98) , Li Si Tay (99) , Madhav P Thakur (100) , Anne M Treasure (101) , Maria Tsiafouli (102) , Mthokozisi N Twala (47) , Alexei V Uvarov (9) , Lisa A Venier (103) , Lina A Widenfalk (104, 64) , Rahayu Widyastuti (105) , Bruna Winck (106) , Daniel Winkler (107) , Donghui Wu (108, 109, 110) , Zhijing Xie (109) , Rui Yin (111) , Robson A Zampaulo (84) , Douglas Zeppelini (112) , Bing Zhang (113) , Abdelmalek Zoughailech (14) , Oliver Ashford (114) , Osmar Klauberg-Filho (79) , Stefan Scheu (1)
1 Johann-Friedrich Blumenbach Institut für Zoologie und Anthropologie
2 iDiv - German Centre for Integrative Biodiversity Research
3 Leipzig University / Universität Leipzig
4 Department of Zoology and Ecology, Institute of Biology and Chemistry, Moscow Pedagogical State University
5 Environmental Science Center, Qatar University, Doha, Qatar
6 UDUESC - Department of Soil Science, Centre for Agriculture and Veterinary Science, Santa Catarina State University (UDUESC Lages), Lages, SC, Brazil
7 Department of Sciences, CEPA Camargo, Astillero, Spain
8 Forest Research, Northern Research Station, Roslin
9 A.N. Severtsov Institute of Ecology and Evolution
10 Visva Bharati University, Bengal, India
11 Department of Animal Science, Santa Catarina State University (UDESC Oeste), Chapecó, SC, Brazil
12 Centre for Marine Science, School of Biological Sciences, University of Queensland
13 UFRGS - Department of Botany and Zoology, Biosciences Center, Federal University of Rio Grande do Norte
14 Laboratoire de bio-systématique et écologie des arthropodes = Arthropod biosystematics and ecology laboratory
15 VU - Vrije Universiteit Amsterdam [Amsterdam]
16 GELIFES - Groningen Institute for Evolutionary Life Sciences [Groningen]
17 Administración de Parques Nacionales, San Antonio, Argentina
18 Systems Ecology, Department of Ecological Science, Vrije Universiteit, Amsterdam, The Netherlands
19 UCD - University College Dublin [Dublin]
20 Department of wood and forest sciences, Université Laval
21 Instituto de Biologia de Solo, Universidade Estadual da Paraíba
22 Center for Transdisciplinary and Sustainability Sciences, IPB University, Jalan Pajajaran, Indonesia
23 Department of Plant Protection, IPB University, Bogor, Indonesia
24 Unidad Multidisciplinaria de Docencia e Investigación, Facultad de Ciencias, Campus Juriquilla, Universidad Nacional Autónoma de México, Querétaro, México
25 UNIROUEN - Université de Rouen Normandie
26 FiBL France
27 Asian School of the Environment, Nanyang Technological University
28 Securing Antarctica’s Environmental Future, School of Biological Sciences, Monash University
29 Department of Ecology and Evolutionary Biology, Museum of Zoology, The University of Michigan Research Museums Center, Ann Arbor, Michigan 48108-2228, USA
30 CEFE - Centre d’Ecologie Fonctionnelle et Evolutive
31 BIOLOGY CENTRE CAS - Institute of Entomology [České Budějovice]
32 Zoology, University of Autónoma de Madrid
33 UFRJ - Universidade Federal do Rio de Janeiro [Brasil] = Federal University of Rio de Janeiro [Brazil] = Université fédérale de Rio de Janeiro [Brésil]
34 ISYEB - Institut de Systématique, Evolution, Biodiversité
35 CREAF - Centre for Ecological Research and Applied Forestries
36 Laboratório de Sistemática de Collembola e Conservação, Coleção de Referência de Fauna de Solo, Instituto de Biologia de Solo, Universidade Estadual da Paraíba
37 Institute of Biology Bucharest, Romanian Academy
38 University of Bremen, FB 02, UFT, General and Theoretical Ecology
39 Section Ecology and Evolution, A-LIFE, Vrije Universiteit Amsterdam
40 Department of Coastal Systems, Royal Netherlands Institute for Sea Research, ‘t Horntje, the Netherlands
41 Insect Ecology Laboratory, Department of Forest Entomology, Forestry and Forest Products Research Institute
42 UQAM - Université du Québec à Montréal = University of Québec in Montréal
43 Faculté de foresterie, de géographie et de géomatique - Centre d'Etude de la Forêt
44 Department of Geography and Spatial Information Techniques, Ningbo University
45 UQO - Université du Québec en Outaouais
46 LEFE - Laboratoire Ecologie Fonctionnelle et Environnement
47 University of Pretoria [South Africa]
48 Department of Environmental System Science, Faculty of Science and Engineering, Doshisha University
49 HES-SO - Haute École spécialisée de Suisse occidentale = HES-SO University of Applied Sciences and Arts Western Switzerland = Fachhochschule Westschweiz [Schweiz]
50 Kyushu University Forest
51 Aarhus University [Aarhus]
52 IRNAS - Instituto de Recursos Naturales y Agrobiología de Sevilla
53 Tallinn University of Technology, Tartu College
54 ESTONIAN UNIVERSITY OF LIFE SCIENCES INSTITUTE OF AGRICULTURAL AND ENVIRONMENTAL SCIENCES RUNNU EST
55 Aberystwyth University
56 Department of Biological Sciences, University of Cape Town, Cape Town, South Africa
57 Research and Exhibitions Department, Iziko Museums of South Africa
58 JMU - Julius-Maximilians-Universität Würzburg = University of Würzburg [Würsburg, Germany]
59 ECOSYS - Ecologie fonctionnelle et écotoxicologie des agroécosystèmes
60 Quantitative Ecology Lab, Department of Ecology, Universidade Federal do Rio Grande do Sul
61 Institute of Biology, University of Latvia, Riga, Latvia
62 Agricultural University of Iceland
63 University of Pavol Jozef Šafárik
64 SLU - Swedish University of Agricultural Sciences = Sveriges lantbruksuniversitet
65 Key Laboratory of the Three Gorges Reservoir Region’s Eco-Environment, Ministry of Education, Chongqing University, Chongqing, China
66 UWO - University of Western Ontario
67 Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University
68 Biología, Facultad de Ciencias, Universidad Autónoma de Madrid
69 Institute of Zoology, Johannes Gutenberg University Mainz
70 Department of BioSciences, Rice University, Houston
71 Ecology & Zoology Group, School of Natural Sciences, Massey University
72 Te Aka Mātuatua – School of Science, The University of Waikato, New Zealand
73 Department of Landscape Architecture, Cambridge
74 BC3 - Basque Centre for Climate Change
75 Graduate School of Environment and Information Sciences, Yokohama National University, Yokohama, Japan
76 Department of Sustainable Crop Production (DI.PRO.VE.S.), Università Cattolica del Sacro Cuore, Piacenza, Italy
77 Western Sydney University, Hawkesbury Institute for the Environment
78 Department of Biology, IVAGRO, University of Cádiz
79 Department of Soil Science, Centre for Agriculture and Veterinary Science, Santa Catarina State University (UDESC-Lages), Lages, SC, Brazil
80 Laboratorio de Ecología, Dept. Ecología y Recursos Naturales, Facultad de Cienicas, UNAM
81 MECADEV - Mécanismes Adaptatifs et Evolution
82 Natural History Museum Vienna, 1. Zoology
83 Center of Excellence in Environmental Studies, King Abdulaziz University, Jeddah 21589, KSA.
84 Observatório Espeleológico
85 Department of Soil Zoology, Senckenberg Society for Nature Research, Görlitz, Germany
86 IMBE - Institut méditerranéen de biodiversité et d'écologie marine et continentale
87 Forest Research Institute of the Karelian Research Centre of the Russian Academy of Sciences
88 Lancaster Environment Centre, Lancaster University, Lancaster, United Kingdom
89 Smithsonian Tropical Research Institute
90 BOKU - Universität für Bodenkultur Wien = University of Natural Resources and Life Sciences [Vienne, Autriche]
91 Institute for Alpine Environment, Eurac Research
92 Universität Innsbruck [Innsbruck]
93 School of Life and Health Sciences, Whitelands College,
94 Scientific department, State Nature Reserve “Privolzhskaya Lesostep”
95 SB RAS - Siberian Branch of the Russian Academy of Sciences
96 MIZ PAN = MIZ PAS - Muzeum i Instytut Zoologii Polskiej Akademii Nauk = Museum and Institute of Zoology, Polish Academy of Sciences = Musée et Institut de zoologie, Académie polonaise des sciences
97 Key Laboratory of Urban Environment and Health, Ningbo Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences
98 Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences
99 Tropical Ecology & Entomology Lab, Asian School of the Environment, Nanyang Technological University
100 Institute of Ecology and Evolution, University of Bern
101 Data, Products and Society Node, South African Polar Research Infrastructure (SAPRI),
102 Aristotle University of Thessaloniki
103 Natural Resources Canada, Canadian Forest Service, Laurentian Forestry Centre, Québec, Canada
104 Greensway AB, Uppsala, Sweden
105 Department of Soil Science, IPB University
106 UREP - Unité Mixte de Recherche sur l'Ecosystème Prairial - UMR
107 Institute of Wildlife Management and Wildlife Biology, University of Sopron, Sopron, Hungary
108 Key laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China
109 Ministry of Education Key Laboratory of Vegetation Ecology, School of Life Sciences, Northeast Normal University, Changchun 130024
110 State Environmental Protection Key Laboratory of Wetland Ecology and Vegetation Restoration, School of Environment, Northeast Normal University
111 Community Department, Helmholtz Center for Environmental Research, Halle, Germany
112 Department of Biology, Institute of Soil Biology, Paraiba State University
113 Key Laboratory for Earth Surface Processes of the Ministry of Education, Institute of Ecology, College of Urban and Environmental Science, Peking University
114 Ocean Program, World Resources Institute
Matthieu Chauvat
Mathilde Chomel
  • Fonction : Auteur
Toke T Høye
Esther M Kapinga
Paul Henning Krogh
Zoë Lindo

Résumé

Springtails (Collembola) inhabit soils from the Arctic to the Antarctic and comprise an estimated ~32% of all terrestrial arthropods on Earth. Here, we present a global, spatially-explicit database on springtail communities that includes 249,912 occurrences from 44,999 samples and 2,990 sites. These data are mainly raw sample-level records at the species level collected predominantly from private archives of the authors that were quality-controlled and taxonomically-standardised. Despite covering all continents, most of the sample-level data come from the European continent (82.5% of all samples) and represent four habitats: woodlands (57.4%), grasslands (14.0%), agrosystems (13.7%) and scrublands (9.0%). We included sampling by soil layers, and across seasons and years, representing temporal and spatial within-site variation in springtail communities. We also provided data use and sharing guidelines and R code to facilitate the use of the database by other researchers. This data paper describes a static version of the database at the publication date, but the database will be further expanded to include underrepresented regions and linked with trait data.
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hal-04373947 , version 1 (05-01-2024)

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Anton M Potapov, Ting-Wen Chen, Anastasia V Striuchkova, Juha M Alatalo, Douglas Alexandre, et al.. Global fine-resolution data on springtail abundance and community structure. Scientific Data , 2024, 11 (1), pp.22. ⟨10.1038/s41597-023-02784-x⟩. ⟨hal-04373947⟩
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