<?xml version="1.0" encoding="utf-8"?>
<TEI xmlns="http://www.tei-c.org/ns/1.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:hal="http://hal.archives-ouvertes.fr/" xmlns:gml="http://www.opengis.net/gml/3.3/" xmlns:gmlce="http://www.opengis.net/gml/3.3/ce" version="1.1" xsi:schemaLocation="http://www.tei-c.org/ns/1.0 http://api.archives-ouvertes.fr/documents/aofr-sword.xsd">
  <teiHeader>
    <fileDesc>
      <titleStmt>
        <title>HAL TEI export of hal-04304559v2</title>
      </titleStmt>
      <publicationStmt>
        <distributor>CCSD</distributor>
        <availability status="restricted">
          <licence target="https://creativecommons.org/publicdomain/zero/1.0/">CC0 1.0 - Universal</licence>
        </availability>
        <date when="2026-05-23T00:38:26+02:00"/>
      </publicationStmt>
      <sourceDesc>
        <p part="N">HAL API Platform</p>
      </sourceDesc>
    </fileDesc>
  </teiHeader>
  <text>
    <body>
      <listBibl>
        <biblFull>
          <titleStmt>
            <title xml:lang="en">Easy16S: a user-friendly Shiny web-service for exploration and visualization of microbiome data</title>
            <author role="aut">
              <persName>
                <forename type="first">Cédric</forename>
                <surname>Midoux</surname>
              </persName>
              <email type="md5">fd8ea27e0a81a7ff2cff6bec31f841df</email>
              <email type="domain">inrae.fr</email>
              <idno type="idhal" notation="string">cedric-midoux</idno>
              <idno type="idhal" notation="numeric">734961</idno>
              <idno type="halauthorid" notation="string">54016-734961</idno>
              <idno type="ORCID">https://orcid.org/0000-0002-7964-0929</idno>
              <idno type="GOOGLE SCHOLAR">https://scholar.google.fr/citations?user=lAzGLCIAAAAJ&amp;hl=fr</idno>
              <affiliation ref="#struct-1002496"/>
              <affiliation ref="#struct-1002434"/>
              <affiliation ref="#struct-1124613"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Olivier</forename>
                <surname>Rué</surname>
              </persName>
              <email type="md5">d65d58117fa14b7a9eb45c84044ee41c</email>
              <email type="domain">inrae.fr</email>
              <idno type="idhal" notation="string">olivier-rue</idno>
              <idno type="idhal" notation="numeric">736218</idno>
              <idno type="halauthorid" notation="string">48833-736218</idno>
              <idno type="ORCID">https://orcid.org/0000-0001-7517-4724</idno>
              <affiliation ref="#struct-1002434"/>
              <affiliation ref="#struct-1124613"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Olivier</forename>
                <surname>Chapleur</surname>
              </persName>
              <email type="md5">74a3696eebdaf96f792fae3d0e95bf13</email>
              <email type="domain">inrae.fr</email>
              <idno type="idhal" notation="string">olivier-chapleur</idno>
              <idno type="idhal" notation="numeric">1203176</idno>
              <idno type="halauthorid" notation="string">802402-1203176</idno>
              <idno type="ORCID">https://orcid.org/0000-0001-9460-921X</idno>
              <idno type="IDREF">https://www.idref.fr/176243917</idno>
              <idno type="GOOGLE SCHOLAR">https://scholar.google.fr/citations?user=16Ge0joAAAAJ</idno>
              <idno type="VIAF">https://viaf.org/viaf/306484280</idno>
              <affiliation ref="#struct-1002496"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Ariane</forename>
                <surname>Bize</surname>
              </persName>
              <email type="md5">c8439707a326d63bfe04554874447afd</email>
              <email type="domain">inrae.fr</email>
              <idno type="idhal" notation="string">ariane-bize</idno>
              <idno type="idhal" notation="numeric">801302</idno>
              <idno type="halauthorid" notation="string">356204-801302</idno>
              <idno type="ORCID">https://orcid.org/0000-0003-4023-8665</idno>
              <idno type="IDREF">https://www.idref.fr/147944171</idno>
              <affiliation ref="#struct-1002496"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Valentin</forename>
                <surname>Loux</surname>
              </persName>
              <email type="md5">a5696b5b1e76dea8cfee772d50ae0295</email>
              <email type="domain">inrae.fr</email>
              <idno type="idhal" notation="string">valentin-loux</idno>
              <idno type="idhal" notation="numeric">736071</idno>
              <idno type="halauthorid" notation="string">48854-736071</idno>
              <idno type="ORCID">https://orcid.org/0000-0002-8268-915X</idno>
              <idno type="GOOGLE SCHOLAR">https://scholar.google.fr/citations?user=j4FDjDgAAAAJ&amp;hl=fr&amp;oi=ao</idno>
              <idno type="IDREF">https://www.idref.fr/253136016</idno>
              <affiliation ref="#struct-1002434"/>
              <affiliation ref="#struct-1124613"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Mahendra</forename>
                <surname>Mariadassou</surname>
              </persName>
              <email type="md5">c882a6dc628496d648db8b6db85dc44c</email>
              <email type="domain">inrae.fr</email>
              <idno type="idhal" notation="string">mahendra-mariadassou</idno>
              <idno type="idhal" notation="numeric">172671</idno>
              <idno type="halauthorid" notation="string">54017-172671</idno>
              <idno type="ORCID">https://orcid.org/0000-0003-2986-354X</idno>
              <idno type="IDREF">https://www.idref.fr/142892092</idno>
              <affiliation ref="#struct-1002434"/>
              <affiliation ref="#struct-1124613"/>
            </author>
            <editor role="depositor">
              <persName>
                <forename>Cédric</forename>
                <surname>Midoux</surname>
              </persName>
              <email type="md5">fd8ea27e0a81a7ff2cff6bec31f841df</email>
              <email type="domain">inrae.fr</email>
            </editor>
          </titleStmt>
          <editionStmt>
            <edition n="v1">
              <date type="whenSubmitted">2023-11-24 11:22:00</date>
            </edition>
            <edition n="v2" type="current">
              <date type="whenSubmitted">2024-08-14 10:34:15</date>
              <date type="whenModified">2026-05-05 15:52:58</date>
              <date type="whenReleased">2024-10-18 15:00:29</date>
              <date type="whenProduced">2024-08-14</date>
              <date type="whenEndEmbargoed"/>
              <ref type="file" target="https://hal.science/hal-04304559v2/document"/>
              <fs>
                <f name="inra_publicVise_local" notation="string" n="SC">
                  <string>inra_publicVise_local_SC</string>
                </f>
              </fs>
            </edition>
            <respStmt>
              <resp>contributor</resp>
              <name key="538184">
                <persName>
                  <forename>Cédric</forename>
                  <surname>Midoux</surname>
                </persName>
                <email type="md5">fd8ea27e0a81a7ff2cff6bec31f841df</email>
                <email type="domain">inrae.fr</email>
              </name>
            </respStmt>
          </editionStmt>
          <publicationStmt>
            <distributor>CCSD</distributor>
            <idno type="halId">hal-04304559</idno>
            <idno type="halUri">https://hal.science/hal-04304559</idno>
            <idno type="halBibtex">midoux:hal-04304559</idno>
            <idno type="halRefHtml">2024, &lt;a target="_blank" style="word-break: break-all;" href="https://archive.softwareheritage.org/browse/swh:1:rel:35d2caacc87474efa1f1e277f5eb13352962793d"&gt;&amp;#x27E8;swh:1:rel:35d2caacc87474efa1f1e277f5eb13352962793d&amp;#x27E9;&lt;/a&gt;</idno>
            <idno type="halRef">2024, &amp;#x27E8;swh:1:rel:35d2caacc87474efa1f1e277f5eb13352962793d&amp;#x27E9;</idno>
            <availability status="restricted">
              <licence target="https://www.gnu.org/licenses/agpl.txt">GNU Affero General Public License v3.0</licence>
            </availability>
          </publicationStmt>
          <seriesStmt>
            <idno type="stamp" n="TESTANNE">Anne</idno>
            <idno type="stamp" n="UNIV-PARIS-SACLAY">Université Paris-Saclay</idno>
            <idno type="stamp" n="SOFTWARE">SOFTWARE</idno>
            <idno type="stamp" n="INRAE">Institut National de Recherche en Agriculture, Alimentation et Environnement</idno>
            <idno type="stamp" n="INRAE-UPSACLAY" corresp="UNIV-PARIS-SACLAY">INRAE-UPSACLAY</idno>
            <idno type="stamp" n="GS-MATHEMATIQUES">Graduate School Mathématiques</idno>
            <idno type="stamp" n="GS-COMPUTER-SCIENCE">Graduate School Computer Science</idno>
            <idno type="stamp" n="GS-BIOSPHERA">Graduate School Biologie, Société, Ecologie &amp; Environnement, Ressources, Agriculture &amp; Alimentation</idno>
            <idno type="stamp" n="MAIAGE">MaIAGE</idno>
            <idno type="stamp" n="MICA-UNITES">MICA-Unités </idno>
            <idno type="stamp" n="MATHNUM">Département MathNum</idno>
            <idno type="stamp" n="PROSE">PROSE</idno>
            <idno type="stamp" n="BIOINFOMICS">Infrastructure de Recherche INRAE en bioinformatique</idno>
            <idno type="stamp" n="TEST-MATHNUM">Test MathNum</idno>
            <idno type="stamp" n="APT_TEST">APT_TEST</idno>
          </seriesStmt>
          <notesStmt>
            <note type="version">v24.07</note>
            <note type="programmingLanguage">R</note>
            <note type="programmingLanguage">R-shiny</note>
          </notesStmt>
          <sourceDesc>
            <biblStruct>
              <analytic>
                <title xml:lang="en">Easy16S: a user-friendly Shiny web-service for exploration and visualization of microbiome data</title>
                <author role="aut">
                  <persName>
                    <forename type="first">Cédric</forename>
                    <surname>Midoux</surname>
                  </persName>
                  <email type="md5">fd8ea27e0a81a7ff2cff6bec31f841df</email>
                  <email type="domain">inrae.fr</email>
                  <idno type="idhal" notation="string">cedric-midoux</idno>
                  <idno type="idhal" notation="numeric">734961</idno>
                  <idno type="halauthorid" notation="string">54016-734961</idno>
                  <idno type="ORCID">https://orcid.org/0000-0002-7964-0929</idno>
                  <idno type="GOOGLE SCHOLAR">https://scholar.google.fr/citations?user=lAzGLCIAAAAJ&amp;hl=fr</idno>
                  <affiliation ref="#struct-1002496"/>
                  <affiliation ref="#struct-1002434"/>
                  <affiliation ref="#struct-1124613"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Olivier</forename>
                    <surname>Rué</surname>
                  </persName>
                  <email type="md5">d65d58117fa14b7a9eb45c84044ee41c</email>
                  <email type="domain">inrae.fr</email>
                  <idno type="idhal" notation="string">olivier-rue</idno>
                  <idno type="idhal" notation="numeric">736218</idno>
                  <idno type="halauthorid" notation="string">48833-736218</idno>
                  <idno type="ORCID">https://orcid.org/0000-0001-7517-4724</idno>
                  <affiliation ref="#struct-1002434"/>
                  <affiliation ref="#struct-1124613"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Olivier</forename>
                    <surname>Chapleur</surname>
                  </persName>
                  <email type="md5">74a3696eebdaf96f792fae3d0e95bf13</email>
                  <email type="domain">inrae.fr</email>
                  <idno type="idhal" notation="string">olivier-chapleur</idno>
                  <idno type="idhal" notation="numeric">1203176</idno>
                  <idno type="halauthorid" notation="string">802402-1203176</idno>
                  <idno type="ORCID">https://orcid.org/0000-0001-9460-921X</idno>
                  <idno type="IDREF">https://www.idref.fr/176243917</idno>
                  <idno type="GOOGLE SCHOLAR">https://scholar.google.fr/citations?user=16Ge0joAAAAJ</idno>
                  <idno type="VIAF">https://viaf.org/viaf/306484280</idno>
                  <affiliation ref="#struct-1002496"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Ariane</forename>
                    <surname>Bize</surname>
                  </persName>
                  <email type="md5">c8439707a326d63bfe04554874447afd</email>
                  <email type="domain">inrae.fr</email>
                  <idno type="idhal" notation="string">ariane-bize</idno>
                  <idno type="idhal" notation="numeric">801302</idno>
                  <idno type="halauthorid" notation="string">356204-801302</idno>
                  <idno type="ORCID">https://orcid.org/0000-0003-4023-8665</idno>
                  <idno type="IDREF">https://www.idref.fr/147944171</idno>
                  <affiliation ref="#struct-1002496"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Valentin</forename>
                    <surname>Loux</surname>
                  </persName>
                  <email type="md5">a5696b5b1e76dea8cfee772d50ae0295</email>
                  <email type="domain">inrae.fr</email>
                  <idno type="idhal" notation="string">valentin-loux</idno>
                  <idno type="idhal" notation="numeric">736071</idno>
                  <idno type="halauthorid" notation="string">48854-736071</idno>
                  <idno type="ORCID">https://orcid.org/0000-0002-8268-915X</idno>
                  <idno type="GOOGLE SCHOLAR">https://scholar.google.fr/citations?user=j4FDjDgAAAAJ&amp;hl=fr&amp;oi=ao</idno>
                  <idno type="IDREF">https://www.idref.fr/253136016</idno>
                  <affiliation ref="#struct-1002434"/>
                  <affiliation ref="#struct-1124613"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Mahendra</forename>
                    <surname>Mariadassou</surname>
                  </persName>
                  <email type="md5">c882a6dc628496d648db8b6db85dc44c</email>
                  <email type="domain">inrae.fr</email>
                  <idno type="idhal" notation="string">mahendra-mariadassou</idno>
                  <idno type="idhal" notation="numeric">172671</idno>
                  <idno type="halauthorid" notation="string">54017-172671</idno>
                  <idno type="ORCID">https://orcid.org/0000-0003-2986-354X</idno>
                  <idno type="IDREF">https://www.idref.fr/142892092</idno>
                  <affiliation ref="#struct-1002434"/>
                  <affiliation ref="#struct-1124613"/>
                </author>
              </analytic>
              <monogr>
                <imprint/>
              </monogr>
              <idno type="doi">10.57745/ZN1HXQ</idno>
              <idno type="swhid">swh:1:rel:35d2caacc87474efa1f1e277f5eb13352962793d</idno>
              <ref type="codeRepository" target="https://forge.inrae.fr/migale/easy16s"/>
              <ref target="https://hub.docker.com/r/cmidoux/easy16s" type="seeAlso"/>
              <ref target="https://shiny.migale.inrae.fr/app/easy16S" type="seeAlso"/>
              <ref target="https://easy16s.migale.inrae.fr/" type="seeAlso"/>
              <relatedItem target="https://hal.inrae.fr/hal-04785149v1" type="Cites" subtype="http://purl.org/coar/resource_type/c_6501"/>
              <relatedItem target="https://doi.org/10.57745/ZN1HXQ" type="Cites" subtype="http://purl.org/coar/resource_type/c_ddb1"/>
            </biblStruct>
          </sourceDesc>
          <profileDesc>
            <langUsage>
              <language ident="en">English</language>
            </langUsage>
            <textClass>
              <classCode scheme="halDomain" n="info.info-bi">Computer Science [cs]/Bioinformatics [q-bio.QM]</classCode>
              <classCode scheme="halTypology" n="SOFTWARE">Software</classCode>
              <classCode scheme="halOldTypology" n="SOFTWARE">Software</classCode>
              <classCode scheme="halTreeTypology" n="SOFTWARE">Software</classCode>
            </textClass>
          </profileDesc>
        </biblFull>
      </listBibl>
    </body>
    <back>
      <listOrg type="structures">
        <org type="laboratory" xml:id="struct-1002496" status="VALID">
          <idno type="RNSR">200518614R</idno>
          <orgName>Procédés biotechnologiques au service de l'environnement</orgName>
          <orgName type="acronym">UR PROSE</orgName>
          <date type="start">2020-01-01</date>
          <desc>
            <address>
              <addrLine>1 rue Pierre-Gilles de GennesCS 10030 92761 Antony Cedex</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">https://www6.jouy.inrae.fr/prose/</ref>
          </desc>
          <listRelation>
            <relation name="UR1461" active="#struct-577435" type="direct"/>
          </listRelation>
        </org>
        <org type="laboratory" xml:id="struct-1002434" status="VALID">
          <idno type="RNSR">201521778L</idno>
          <orgName>Mathématiques et Informatique Appliquées du Génome à l'Environnement [Jouy-En-Josas]</orgName>
          <orgName type="acronym">MaIAGE</orgName>
          <date type="start">2020-01-01</date>
          <desc>
            <address>
              <addrLine>Bât. 233, Domaine de Vilvert - 78352 Jouy-en-Josas Cedex</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">https://maiage.inrae.fr</ref>
          </desc>
          <listRelation>
            <relation name="UPR 1404" active="#struct-577435" type="direct"/>
          </listRelation>
        </org>
        <org type="department" xml:id="struct-1124613" status="VALID">
          <orgName>IR BioInfOmics</orgName>
          <date type="start">2019-01-01</date>
          <desc>
            <address>
              <addrLine>Jouy-en-Josas - Toulouse - Versailles</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">https://bioinfomics.inrae.fr/</ref>
          </desc>
          <listRelation>
            <relation active="#struct-577435" type="direct"/>
          </listRelation>
        </org>
        <org type="institution" xml:id="struct-577435" status="VALID">
          <idno type="ROR">https://ror.org/003vg9w96</idno>
          <orgName>Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement</orgName>
          <orgName type="acronym">INRAE</orgName>
          <date type="start">2020-01-01</date>
          <desc>
            <address>
              <country key="FR"/>
            </address>
          </desc>
        </org>
      </listOrg>
    </back>
  </text>
</TEI>