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Rapport Année : 2021

EOSC-Life D1.2 EOSC repository deployment for project demonstrators

1 EMBL-EBI - European Bioinformatics Institute [Hinxton]
2 Fraunhofer ISI - Fraunhofer Institute for Systems and Innovation Research
3 EMBL Heidelberg
4 Centre for Gene Regulation and Expression, School of Life Sciences Dundee
5 Division of Computational Biology
6 University of Dundee
7 UMCG - University Medical Center Groningen [Groningen]
8 BBMRI-ERIC - European research infrastructure for biobanking
9 Consiglio Nazionale delle Ricerche - CNR [Pisa, Italia]
10 CNR - Consiglio Nazionale delle Ricerche [Milano]
11 MRC Harwell Institute [UK]
12 PHENOMIN, GIE CERBM
13 IGBMC - Institut de Génétique et de Biologie Moléculaire et Cellulaire
14 INFRAFRONTIER GmbH [Neuherberg]
15 BSRC - Biomedical Sciences Research Centre Alexander Fleming [Vari, Greece]
16 Departamento de Fisica Teorica and IFIC (CSIC- UVEG)
17 KNAW - Royal Netherlands Academy of Arts and Sciences
18 INRAE - Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement
19 INSEAN - CNR
20 INSERM - Institut National de la Santé et de la Recherche Médicale
21 ERINHA-AISBL - European Research Infrastructure on Highly Pathogenic Agents
22 IBG-2: Plant Sciences
23 VLIZ - Flanders Marine Institute
24 ECRIN - European Clinical Research Infrastructures Network [Dusseldorf]
25 CSIC - Centro de Investigaciones Biológicas
26 IRFMN - Istituto di Ricerche Farmacologiche Mario Negri
27 University of Manchester [Manchester]
28 Oxford e-Research Centre [Oxford]
29 CID - Center for Infectious Diseases [LUMC, Leiden]
Ugis Sarkans
  • Fonction : Auteur
Paolo Romano
  • Fonction : Auteur
Sergey Goryanin
  • Fonction : Auteur

Résumé

This deliverable addresses WP1’s objectives related to publication of data and data resources in cloud repositories by making available resources in EOSC-Life’s registries; the implementation of FAIR services and standards, by development of FAIR registries in collaboration with WP6; and evolution of repository infrastructure by making available registry entries deriving from WP3 demonstrators. Use cases for EOSC-Life registries have been defined for general and clinical research data use and the ‘EOSC-Life’ collection in FAIRsharing has been populated and released comprising more than 100 data resources and standards. A clinical MetaData Repository has also been developed to address challenges of clinical data sharing in Europe. We have engaged with EOSC, sister projects such as FAIRsFAIR and ENVRI to consider the features of registries, cross registry interoperability and use cases which link EOSC projects. We will continue to update the registries as the project progresses and as new dataset and resources are made available and will engage with pan-EOSC registry planning based on our work to date.
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Dates et versions

hal-04162006 , version 1 (13-07-2023)

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Helen Parkinson, Philip Gribbon, Ugis Sarkans, Gesa Witt, Andrea Zaliani, et al.. EOSC-Life D1.2 EOSC repository deployment for project demonstrators. 1.2, Fraunhofer-Institut für Offene Kommunikationssysteme (FOKUS Fraunhofer); EMBL; VU; KNAW; BBMRI; UVEG; USMI; IMG; CNRI; UNIMAN; LUMC; EATRIS; INRAE; ECRIN; EMBRC; EMPHASIS (FZJ); ERINHA; INFRAFRONTIER; UNIMIB; UNIVDUN; HMGU; CERBM; BSCRC; UOULU; CIRMMP; CSIC. 2021. ⟨hal-04162006⟩
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