Pseudo-MRM and the Survival Yield Technique for the accurate quantification of a tryptic peptide despite isobaric co-elution
Résumé
Multiple Reaction Monitoring (MRM) is a quantification technique, usually
performed in triple-quadrupole instruments (QqQ), consisting in the monitoring of
intensities of at least two diagnostic fragment ions (transitions) in CID MS/MS
experiments. In the context of iso-baric/meric interferences, pseudo-MRM is an
alternative mode, applied for the analysis of difficult-to-fragment compounds, which
relies on the monitoring, at high collision energy, of the precursor ions peak only
[1]. Pseudo-MRM has shown good performances for the analysis of complex
samples, due to the reduction, inside the collision cell, of isobaric co-elution.
However, there is not yet a mean for determining optimal conditions for it. We
propose to assess optimal conditions by using Gas Phase Collisional Purification
(GPCP) [2] that relies on Energy Resolved Tandem Mass Spectrometry (ER-MS)
and the Survival Yield technique. This way, optimal excitation voltage can be
selected to fully fragment the iso-baric/meric interference, while keeping the
analyte of interest.
Going a step further by using an internal standard (IS), the monitoring of
analyte/IS ratio at several collision voltages is shown to clearly indicate the
complete fragmentation of the interference with the appearance of a plateau. This
is a clear and very robust indication of the total purification of the analyte. The
concentration of the analyte after GPCP can then be calculated with an IS
calibration curve.[3] We have applied the above-mentioned technique to quantify a
tryptic peptide, at m/z 780.402, in the presence of a co-eluted isobaric interference
with m/z 780.370. A triply deuterated analogue of the tryptic peptide was used as
IS. This approach was applied in two cases: 1) ion trap with an unconventionally 8
m/z wide isolation window (which can be seen as a modified parallel pseudo-MRM
[4]); and 2) single quadrupolar LC-MS with in-source fragmentation. In both cases,
reference samples intentionally contaminated were correctly quantified despite the
isobaric interference with: ~1% deviation, a linear dynamic range up to 25 μM,
detection limit about 0.1 μM and a quantification limit of 0.25 μM.
References
1. D. Shang, M. Kim, M. Haberl; J. Chromatogr. A, 1334, 118-125 (2014)
2. D. Jeanne Dit Fouque, A. Maroto, A. Memboeuf; Anal. Chem., 88, 10821-10825 (2016)
3. D. Jeanne Dit Fouque, A. Maroto, A. Memboeuf; Anal. Chem., 90, 14126-14130 (2018)
4. H. Zhang, H. Jia, Z. Gao, Y. Xiang, T. Jiang, W. Xu; Talanta, 252, 123866-123873 (2022)